Detailed information NTG0866372

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q4S45_RS01540
• Genome accession: NZ_CP131935
• Coordinates: 327744..328865 (-)
• Length: 373 a.a.
• NCBI ID: WP_305508498.1
• Uniprot ID: A0AAT9WGX7
• Organism: Massilia sp. R2A-15
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 322744..333865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4S45_RS01515 (Q4S45_01515)	-	323072..324448 (+)	1377	WP_305508485.1	hypothetical protein	-
Q4S45_RS01520 (Q4S45_01520)	-	324456..324857 (-)	402	WP_305508487.1	hypothetical protein	-
Q4S45_RS01525 (Q4S45_01525)	rpoH	324946..325845 (-)	900	WP_305508489.1	RNA polymerase sigma factor RpoH	-
Q4S45_RS01530 (Q4S45_01530)	ftsX	326155..327075 (-)	921	WP_305508490.1	permease-like cell division protein FtsX	-
Q4S45_RS01535 (Q4S45_01535)	-	327072..327734 (-)	663	WP_305508496.1	cell division ATP-binding protein FtsE	-
Q4S45_RS01540 (Q4S45_01540)	pilA	327744..328865 (-)	1122	WP_305508498.1	signal recognition particle-docking protein FtsY	Machinery gene
Q4S45_RS01545 (Q4S45_01545)	-	328975..329916 (-)	942	WP_305508500.1	MerR family transcriptional regulator	-
Q4S45_RS01550 (Q4S45_01550)	-	330230..331516 (+)	1287	WP_305508502.1	NAD(P)/FAD-dependent oxidoreductase	-
Q4S45_RS01555 (Q4S45_01555)	-	331503..332309 (+)	807	WP_305508504.1	DUF1365 domain-containing protein	-
Q4S45_RS01560 (Q4S45_01560)	-	332315..333529 (+)	1215	WP_305508506.1	cyclopropane-fatty-acyl-phospholipid synthase family protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 39767.15 Da
• Isoelectric Point: 6.5192

>NTDB_id=866372 Q4S45_RS01540 WP_305508498.1 327744..328865(-) (pilA) [Massilia sp. R2A-15]
MFSFFKKKQPVPETAPPPPAPAATPPAPAPIDVIPAATPAPARRYGSTSTFVAPAAPVQEVIAETAERPVAASESRSSWM
ERLKAGLSKTSTNLSLLFVGARIDEDLYEELESALLMADAGMDATQFLLDGLRRKVKEDKLLDAAAVKAALKVLMTDMLR
PLEKPLELGRHEPLVMMISGVNGAGKTTTIGKLAKHMQKYEQSVLLAAGDTFRAAAREQLMVWGQRNNVTVISQASGDPA
AVAFDAVQSGKARGMDVVMVDTAGRLPTQLHLMEELKKIKRVIGKGMDGAPHEVLLVIDGNTGQNALAQVKAFDDALDLT
GLVITKLDGTAKGGVLAAIARTRPVPVYFIGIGEKIEDLQPFKADEFVEALLG

Nucleotide

• Length: 1122 bp

>NTDB_id=866372 Q4S45_RS01540 WP_305508498.1 327744..328865(-) (pilA) [Massilia sp. R2A-15]
ATGTTCAGTTTTTTTAAGAAGAAGCAGCCTGTCCCCGAGACAGCACCGCCACCGCCCGCACCCGCGGCCACGCCCCCGGC
GCCCGCTCCGATCGACGTGATTCCGGCCGCGACGCCGGCGCCGGCGCGCCGCTACGGCTCCACCTCCACCTTCGTCGCCC
CCGCGGCGCCGGTCCAGGAAGTGATCGCCGAAACGGCCGAGCGCCCGGTCGCGGCGTCCGAGTCCAGGTCATCGTGGATG
GAGCGCCTGAAGGCCGGCCTGTCCAAGACCTCGACCAACCTGTCGCTGCTGTTCGTCGGCGCGCGCATCGACGAAGACCT
GTACGAGGAACTCGAGTCGGCGCTGCTGATGGCCGACGCCGGCATGGACGCCACCCAGTTCCTGCTCGACGGCCTGCGCC
GCAAGGTCAAGGAAGACAAGCTGCTCGACGCGGCCGCCGTCAAGGCCGCGCTGAAGGTGCTGATGACCGACATGCTGCGC
CCGCTGGAGAAGCCGCTCGAACTGGGCCGCCACGAGCCGCTGGTGATGATGATCTCGGGCGTGAACGGCGCCGGCAAGAC
CACCACCATCGGCAAGCTCGCCAAGCACATGCAGAAGTACGAGCAGTCGGTGCTGCTGGCCGCCGGCGACACCTTCCGCG
CCGCCGCGCGCGAGCAGCTGATGGTCTGGGGCCAGCGCAATAACGTCACCGTCATCTCGCAGGCCTCGGGCGACCCGGCC
GCCGTGGCGTTCGACGCGGTCCAGTCGGGCAAGGCGCGCGGCATGGACGTGGTGATGGTCGATACCGCCGGCCGCCTGCC
GACCCAGCTGCACCTGATGGAAGAACTGAAGAAAATCAAGCGCGTGATCGGCAAGGGCATGGACGGCGCGCCGCACGAAG
TCCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCGCAGGTCAAGGCCTTCGACGACGCGCTGGACCTCACC
GGCCTGGTGATCACGAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTGGCCGCGATCGCGCGCACCCGCCCGGTGCCGGT
GTACTTCATCGGCATCGGCGAGAAAATCGAAGACCTGCAGCCGTTCAAGGCGGACGAATTCGTCGAAGCGCTGCTCGGAT
AA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (100-152)

• SRP54-type protein, GTPase domain (SRP54) (174-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.202	100	0.571