Detailed information NTG0866359

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: Q7W79_RS21200
• Genome accession: NZ_CP131931
• Coordinates: 2890497..2891543 (+)
• Length: 348 a.a.
• NCBI ID: WP_254894148.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain RP0132
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2885497..2896543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7W79_RS21180 (Q7W79_21625)	rplC	2886071..2886700 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
Q7W79_RS21185 (Q7W79_21630)	rpsJ	2886715..2887026 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
Q7W79_RS21190 (Q7W79_21635)	rpmE	2887484..2887705 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
Q7W79_RS21195 (Q7W79_21640)	priA	2888000..2890203 (+)	2204	Protein_2582	primosomal protein N'	-
Q7W79_RS21200 (Q7W79_21645)	cytR	2890497..2891543 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
Q7W79_RS21205 (Q7W79_21650)	ftsN	2891720..2892265 (+)	546	WP_005484027.1	cell division protein FtsN	-
Q7W79_RS21210 (Q7W79_21655)	hslV	2892430..2892981 (+)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
Q7W79_RS21215 (Q7W79_21660)	hslU	2893005..2894336 (+)	1332	WP_140094404.1	HslU--HslV peptidase ATPase subunit	-
Q7W79_RS21220 (Q7W79_21665)	-	2894521..2895438 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
Q7W79_RS21225 (Q7W79_21670)	rraA	2895515..2896027 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
Q7W79_RS21230 (Q7W79_21675)	zapB	2896132..2896374 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38445.17 Da
• Isoelectric Point: 6.7430

>NTDB_id=866359 Q7W79_RS21200 WP_254894148.1 2890497..2891543(+) (cytR) [Vibrio parahaemolyticus strain RP0132]
MTSSWQKFERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVP
DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEF
APELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKA
VRKLLELPEPPTAIFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELL
KGHDVHSGSRLLETKLVVRGSAAPPQRA

Nucleotide

• Length: 1047 bp

>NTDB_id=866359 Q7W79_RS21200 WP_254894148.1 2890497..2891543(+) (cytR) [Vibrio parahaemolyticus strain RP0132]
ATAACGTCATCTTGGCAAAAATTTGAGAGGTTAAACACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTC
GACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAAAGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTGC
TTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATCTACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCT
GACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGTATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCT
CGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTTTGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTAC
TGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAGAACAAAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTT
GCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAACCTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACT
TGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACACAGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAG
CCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACAGTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCT
GTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCGATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCA
AGAAGCCAAACGACTCGGTCTGCGCGTTCCGCAAGATTTGTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACT
GCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATGAAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTT
AAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAAACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACG
CGCCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (16-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	95.977	0.871