Detailed information NTG0866321

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: Q8A65_RS18100
• Genome accession: NZ_CP131928
• Coordinates: 3632751..3633896 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain VJH504
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3627751..3638896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q8A65_RS18080 (Q8A65_18080)	-	3628648..3629076 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
Q8A65_RS18085 (Q8A65_18085)	-	3629230..3629742 (+)	513	Protein_3506	bacteriocin biosynthesis protein AlbG	-
Q8A65_RS18090 (Q8A65_18090)	-	3629749..3631125 (-)	1377	WP_032875890.1	YncE family protein	-
Q8A65_RS18095 (Q8A65_18095)	-	3631165..3632520 (-)	1356	WP_032875887.1	YncE family protein	-
Q8A65_RS18100 (Q8A65_18100)	rapF	3632751..3633896 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
Q8A65_RS18105 (Q8A65_18105)	-	3633880..3633999 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
Q8A65_RS18110 (Q8A65_18110)	speB	3634122..3634994 (-)	873	WP_032875884.1	agmatinase	-
Q8A65_RS18115 (Q8A65_18115)	speE	3635053..3635883 (-)	831	WP_003151052.1	spermidine synthase	-
Q8A65_RS18120 (Q8A65_18120)	-	3636083..3638155 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
Q8A65_RS18125 (Q8A65_18125)	-	3638180..3638613 (-)	434	Protein_3514	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=866321 Q8A65_RS18100 WP_074534220.1 3632751..3633896(+) (rapF) [Bacillus velezensis strain VJH504]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=866321 Q8A65_RS18100 WP_074534220.1 3632751..3633896(+) (rapF) [Bacillus velezensis strain VJH504]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541