Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   Q7W71_RS06120 Genome accession   NZ_CP131924
Coordinates   1191381..1192064 (+) Length   227 a.a.
NCBI ID   WP_002011351.1    Uniprot ID   R8DDT2
Organism   Bacillus mycoides strain PAMC 29627     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1186381..1197064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7W71_RS06100 - 1187364..1189010 (+) 1647 WP_002125935.1 peptide ABC transporter substrate-binding protein -
  Q7W71_RS06105 - 1189040..1189243 (-) 204 WP_000559981.1 hypothetical protein -
  Q7W71_RS06110 spx 1189824..1190219 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  Q7W71_RS06115 - 1190270..1190944 (-) 675 WP_002011349.1 TerC family protein -
  Q7W71_RS06120 mecA 1191381..1192064 (+) 684 WP_002011351.1 adaptor protein MecA Regulator
  Q7W71_RS06125 - 1192137..1193681 (+) 1545 WP_002064255.1 cardiolipin synthase -
  Q7W71_RS06130 - 1193773..1195008 (+) 1236 WP_002011354.1 competence protein CoiA -
  Q7W71_RS06135 pepF 1195059..1196885 (+) 1827 WP_002011356.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.17 Da        Isoelectric Point: 4.0116

>NTDB_id=866214 Q7W71_RS06120 WP_002011351.1 1191381..1192064(+) (mecA) [Bacillus mycoides strain PAMC 29627]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=866214 Q7W71_RS06120 WP_002011351.1 1191381..1192064(+) (mecA) [Bacillus mycoides strain PAMC 29627]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB R8DDT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546