Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q7W82_RS17385 Genome accession   NZ_CP131914
Coordinates   4022940..4023341 (-) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas indica strain PPL560     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4017940..4028341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7W82_RS17370 (Q7W82_17350) - 4019951..4021987 (-) 2037 WP_160946489.1 methyl-accepting chemotaxis protein -
  Q7W82_RS17375 (Q7W82_17355) - 4022028..4022558 (-) 531 WP_017910264.1 chemotaxis protein CheW -
  Q7W82_RS17380 (Q7W82_17360) - 4022560..4022922 (-) 363 WP_010343242.1 response regulator -
  Q7W82_RS17385 (Q7W82_17365) pilG 4022940..4023341 (-) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  Q7W82_RS17390 (Q7W82_17370) gshB 4023584..4024534 (+) 951 WP_242161105.1 glutathione synthase -
  Q7W82_RS17395 (Q7W82_17375) - 4024531..4025412 (+) 882 WP_242161106.1 energy transducer TonB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=866125 Q7W82_RS17385 WP_003472648.1 4022940..4023341(-) (pilG) [Xanthomonas indica strain PPL560]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=866125 Q7W82_RS17385 WP_003472648.1 4022940..4023341(-) (pilG) [Xanthomonas indica strain PPL560]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGCTTGCGGGTCATGGTGATCGACGATTCGAAAACAATCCGTCG
TACCGCCGAAACGTTGCTGAAGCGCGAAGGGTGCGAAGTGGTGACGGCGACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTTACACGCGAAGAGCTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677