Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   WHO18_RS18805 Genome accession   NZ_CP148128
Coordinates   3567012..3567725 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis isolate FELIX_MS620     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3562012..3572725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO18_RS18785 yvcT 3562156..3563133 (+) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -
  WHO18_RS18790 psdB 3563171..3565111 (-) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  WHO18_RS18795 psdA 3565086..3565865 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  WHO18_RS18800 psdS 3565948..3567018 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  WHO18_RS18805 braR 3567012..3567725 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  WHO18_RS18810 yvzJ 3567872..3568081 (+) 210 WP_003243327.1 lipoprotein -
  WHO18_RS18815 yvcN 3568117..3568881 (-) 765 WP_009968228.1 arylamine N-acetyltransferase -
  WHO18_RS18820 crh 3568882..3569139 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  WHO18_RS18825 whiA 3569163..3570113 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  WHO18_RS18830 mgfK 3570136..3571089 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  WHO18_RS18835 rapZ 3571091..3571978 (-) 888 WP_003243903.1 RNase adapter RapZ -
  WHO18_RS18840 yvcI 3572003..3572479 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=865871 WHO18_RS18805 WP_003244535.1 3567012..3567725(-) (braR) [Bacillus subtilis isolate FELIX_MS620]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=865871 WHO18_RS18805 WP_003244535.1 3567012..3567725(-) (braR) [Bacillus subtilis isolate FELIX_MS620]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43