Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   WHO18_RS16445 Genome accession   NZ_CP148128
Coordinates   3112776..3113471 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis isolate FELIX_MS620     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3107776..3118471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO18_RS16425 yttA 3108203..3108949 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  WHO18_RS16430 bceB 3108986..3110926 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  WHO18_RS16435 bceA 3110916..3111677 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  WHO18_RS16440 bceS 3111779..3112783 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  WHO18_RS16445 braR 3112776..3113471 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  WHO18_RS16450 ytrF 3113568..3114878 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  WHO18_RS16455 ytrE 3114868..3115563 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  WHO18_RS16460 ytrD 3115578..3116555 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  WHO18_RS16465 ytrC 3116585..3117571 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  WHO18_RS16470 ytrB 3117565..3118443 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=865860 WHO18_RS16445 WP_004399109.1 3112776..3113471(-) (braR) [Bacillus subtilis isolate FELIX_MS620]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=865860 WHO18_RS16445 WP_004399109.1 3112776..3113471(-) (braR) [Bacillus subtilis isolate FELIX_MS620]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377