Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   WHO18_RS09735 Genome accession   NZ_CP148128
Coordinates   1917232..1917849 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis isolate FELIX_MS620     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1912232..1922849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO18_RS09705 yndJ 1912546..1914186 (+) 1641 WP_003231612.1 YndJ family protein -
  WHO18_RS09710 - 1914274..1914588 (+) 315 WP_003245621.1 hypothetical protein -
  WHO18_RS09715 pghL 1914814..1915572 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  WHO18_RS09720 - 1915599..1916048 (-) 450 WP_003245454.1 YndM family protein -
  WHO18_RS09725 fosM 1916256..1916690 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  WHO18_RS09730 - 1916599..1916895 (+) 297 WP_223257629.1 hypothetical protein -
  WHO18_RS09735 dinR/lexA 1917232..1917849 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  WHO18_RS09740 yneA 1917999..1918316 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  WHO18_RS09745 dinL 1918335..1918988 (+) 654 WP_003231596.1 recombinase family protein -
  WHO18_RS09750 ynzC 1919052..1919285 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  WHO18_RS09755 recP/tkt 1919454..1921457 (+) 2004 WP_003245397.1 transketolase Machinery gene
  WHO18_RS09760 sirA 1921610..1922056 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  WHO18_RS09765 yneF 1922142..1922360 (+) 219 WP_003221221.1 YneF family protein -
  WHO18_RS09770 ynzD 1922434..1922607 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=865816 WHO18_RS09735 WP_003238209.1 1917232..1917849(-) (dinR/lexA) [Bacillus subtilis isolate FELIX_MS620]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=865816 WHO18_RS09735 WP_003238209.1 1917232..1917849(-) (dinR/lexA) [Bacillus subtilis isolate FELIX_MS620]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1