Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   Q7572_RS17235 Genome accession   NZ_CP131878
Coordinates   3524804..3527032 (+) Length   742 a.a.
NCBI ID   WP_004883502.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3519804..3532032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS17205 (Q7572_17240) lnt 3519840..3521399 (+) 1560 WP_004883491.1 apolipoprotein N-acyltransferase -
  Q7572_RS17210 (Q7572_17245) - 3521401..3521739 (-) 339 WP_002156976.1 tRNA-binding protein -
  Q7572_RS17215 (Q7572_17250) - 3521980..3522240 (+) 261 WP_004710772.1 DUF2798 domain-containing protein -
  Q7572_RS17220 (Q7572_17255) - 3522301..3522645 (-) 345 WP_004883496.1 hypothetical protein -
  Q7572_RS17225 (Q7572_17260) gspG 3522911..3523426 (-) 516 WP_004883497.1 type II secretion system major pseudopilin GspG -
  Q7572_RS17230 (Q7572_17265) gspF 3523450..3524655 (-) 1206 WP_004883501.1 type II secretion system inner membrane protein GspF -
  Q7572_RS17235 (Q7572_17270) priA 3524804..3527032 (+) 2229 WP_004883502.1 primosomal protein N' Machinery gene
  Q7572_RS17240 (Q7572_17275) - 3527108..3528949 (+) 1842 WP_004710778.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  Q7572_RS17245 (Q7572_17280) - 3529115..3529990 (+) 876 WP_004710781.1 Hsp33 family molecular chaperone HslO -
  Q7572_RS17250 (Q7572_17285) - 3530127..3530738 (+) 612 WP_004883506.1 LysE family translocator -
  Q7572_RS17255 (Q7572_17290) - 3530888..3531847 (+) 960 WP_004883508.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83917.80 Da        Isoelectric Point: 8.6657

>NTDB_id=865731 Q7572_RS17235 WP_004883502.1 3524804..3527032(+) (priA) [Acinetobacter nosocomialis strain 2014S01-097]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKVQYERAQVGSRVAISFGRQNLIGIITEKVDPQESFTGNFQLKAISELL
DDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNVEALLKRSIKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLIDCTLEPHDFSPAPVQLAQMPLTLNDDQKKATQHVINAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVLLGSATPSIDSYHLVETGKLTALQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGGIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ
LVHAQRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=865731 Q7572_RS17235 WP_004883502.1 3524804..3527032(+) (priA) [Acinetobacter nosocomialis strain 2014S01-097]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTTGCCGTACCTGTGCATCTGTACGACACTTTTGA
CTATACACTCACCAAAGTACAATATGAACGGGCTCAAGTAGGTTCACGCGTCGCAATTTCATTTGGACGGCAAAACCTGA
TTGGTATCATTACTGAAAAAGTTGACCCACAAGAATCATTTACAGGTAACTTTCAGCTTAAAGCCATTTCTGAACTTTTA
GATGATGAGCCTATTTTAGATGAACAAGTTTTAAATTTATTGACATGGTCAGCACAATATTACCAATTTCCGATTGGTGA
GGTGATGCAAACTGCTTTACCTGCGTTATTGCGTCAGGGCAAACCCATGGATGTGTTATTTCATTTATGGAAAATCATTC
CATGTGACAATGTTGAAGCTCTGCTAAAACGCTCAATCAAACAACAAGACGCTTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAAAATATTCTTAATTTGAGTGGTGTAGAAACTGCGACACTTAAAGCACTGCAAAAGAAAGGACTGATAGA
CTGTACACTTGAGCCTCATGACTTTAGTCCAGCACCTGTGCAATTGGCTCAAATGCCACTCACGTTAAATGATGACCAAA
AGAAGGCAACTCAACACGTCATTAATGCGCAGCATCAATACCAAGCATTTTTACTAGATGGCTTAACTGGAAGTGGTAAA
ACCGAAGTTTATTTGCACATCATGCATGAAGTGCTAAAGCAAGGTAAGCAAGTCCTAGTATTGGTTCCTGAAATTGGCTT
AACCCCTCAAACTATTTCACGTTTTAAGTCTCGTTTTAATTGCGATATTGCTTTACTGCATTCGGGCTTAAATGACTCTA
AACGCTTACAAGCATGGCAACAGGCACAAACTGGCAAAGCCTCTATTATTTTAGGGACTCGCTCAGCCATCTATACACCG
CTGCCACGTTTGGGCCTTATCATTTTAGATGAAGAGCATGACCTGTCTTATAAACAGCAAGAAGGCTTTCGTTACCATGC
GCGTGATGTCGCGCTTTACCGCGGACATTTACAAGGCTGTCCTGTTCTTTTAGGTTCGGCAACCCCAAGCATTGATAGCT
ATCACTTAGTCGAAACTGGCAAGTTAACTGCACTTCAGCTGAACCAACGTGCAGGCCATGCACTTTTACCAAAAATGCAT
TTGATTGATCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAGCAAATTAAAAATACCCTAGCAAG
AAAAGAACAGGTTTTAATTTTTTTAAACCGACGTGGTTATGCACCTGTTCTGGTCTGTGAAAGTTGTGGTTGGCAAGCGA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACATTGTCACCACTGCGGCACGGTT
CATCGCTTGCCAGACCACTGCCCTGAATGTCAGCAGAAGAGTTTAAAAACTTTAGGTGCTGGCACAGCCAAGGTTGAAGA
GCATTTACAAGAATTATTTCCAGATCATGATGTGATTCGGGTCGATCGTGACAGCACCAGCCGAGTCGGTAGCTGGCAAA
AAATTTATGATCGCATTCAGCAAAATAAACCTTCGATTTTGCTTGGTACGCAAATGTTGGCAAAAGGTCACCATTTTCCA
CATGTGACCTTGGTTGCTATTTTAGATATTGATGCAGGTTTATTGAGTGTCGATATTCGAGCGCCAGAGCGTACTGCTCA
ATTGATTGTACAAGTGGCTGGTCGTGCAGGTCGTGGAGAACATAAAGGCCATGTTTATTTACAGACTTTAAGGCCAGATC
ACCCTTTATTAACCACGCTTATTGAAAAAGATTATCGGGCAGTCGCAAAGCAAACATTGGCTGAACGTAAAGTTGCTTTA
CTGCCGCCTTATCGTTATGCAGTTTTAATTCGTGCTGAGTCAAAAGATCGTGACTATACTTTACATTTTTTAAATGAAGC
TGCCGAGCAACTTCGCCAAATTGCAGGTGGTATTGTTGATATTTGGGGGCCAATTCCCGCACCAATGGAACGTAAAGCGG
GACGTTACCGCGCCCATATGGTGATTTTGTCTGCTGACCGCGCTCGTCTGCATTTTTACTTAAGACAATGGTGGGCTCAG
TTGGTCCATGCGCAAAGACAGCATCAACTCAGACTCTCTATTGATGTTGACCCGCAAGAATTTAGTTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(208-369)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.574

100

0.976