Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   Q7572_RS02565 Genome accession   NZ_CP131878
Coordinates   531592..532476 (+) Length   294 a.a.
NCBI ID   WP_004884547.1    Uniprot ID   A0AAV3IQW2
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 526592..537476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS02540 (Q7572_02545) - 526984..528231 (-) 1248 WP_002050751.1 YihY family inner membrane protein -
  Q7572_RS02545 (Q7572_02550) wrbA 528512..529114 (+) 603 WP_004884550.1 NAD(P)H:quinone oxidoreductase -
  Q7572_RS02550 (Q7572_02555) - 529169..529744 (-) 576 WP_002050789.1 xanthine phosphoribosyltransferase -
  Q7572_RS02555 (Q7572_02560) - 529816..530529 (-) 714 WP_002050776.1 DUF3108 domain-containing protein -
  Q7572_RS02560 (Q7572_02565) - 530687..531358 (-) 672 WP_004884549.1 hypothetical protein -
  Q7572_RS02565 (Q7572_02570) tonB2 531592..532476 (+) 885 WP_004884547.1 energy transducer TonB Machinery gene
  Q7572_RS02570 (Q7572_02575) ybeY 532565..533041 (-) 477 WP_004711856.1 rRNA maturation RNase YbeY -
  Q7572_RS02575 (Q7572_02580) - 533051..534139 (-) 1089 WP_002050786.1 PhoH family protein -
  Q7572_RS02580 (Q7572_02585) miaB 534177..535628 (-) 1452 WP_002050781.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33600.40 Da        Isoelectric Point: 9.1438

>NTDB_id=865714 Q7572_RS02565 WP_004884547.1 531592..532476(+) (tonB2) [Acinetobacter nosocomialis strain 2014S01-097]
MLNKRSLSIEPFHYWWQDRVFIVAIILAILLHTFVLLIHFVMPAPSEQSTKEIAISVRPTEEIVKHADFLAQADQQGSGT
FRAAHRMSSNSPTPMPTDASTGDAQLDTLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=865714 Q7572_RS02565 WP_004884547.1 531592..532476(+) (tonB2) [Acinetobacter nosocomialis strain 2014S01-097]
ATGTTGAATAAAAGAAGTCTTTCTATAGAGCCTTTTCATTATTGGTGGCAAGACCGAGTCTTTATTGTCGCGATAATACT
CGCAATCTTATTGCATACTTTTGTGCTGCTCATCCATTTTGTGATGCCTGCACCATCAGAACAATCGACTAAAGAAATTG
CGATATCGGTTCGTCCTACAGAAGAGATCGTTAAGCATGCAGACTTTTTAGCTCAAGCAGACCAGCAGGGTTCGGGAACT
TTTCGAGCGGCTCATCGAATGTCCAGTAATTCTCCGACGCCTATGCCGACTGATGCTTCAACTGGCGATGCTCAGCTAGA
CACTTTGGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTATTAATGACTGTGTTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGGAAAAAAGCACTTGAACAGTTACAGAGCCAATTTCAAGCAAAAGCTGCAATGGTCGCAAGT
CTTGAAGCTCAATATTTGCAACGTCAGCAAGATTTCAGCCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCCTCAGCAGCTTATCTAGATAAATTCCGTGAAAAAGTAGAGCTTTACGGTAACCGCTATTATCCAGAAGAAG
CCAAGCAGCAACAGCTAAAAGGTGAAGTCCGCCTTATGGTGATTTTAAATGCTCAAGGGGGAATTCGTGCAATTCGTTTA
CTTGAAAGTTCAGGGCATCCAGTTTTAGATGAGGCAGCAAAGGCATCAGTACGTCGTGGAGCGCCGTTTGGTCGTTTTGA
TGCAAATATGAAGGATATTTCCGAGCTACGTATTGTACGTACTTGGCGTTTTGATCCAGCTGAAGCCGAGTTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

94.558

100

0.946