Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   Q7573_RS17665 Genome accession   NZ_CP131873
Coordinates   3700022..3701155 (+) Length   377 a.a.
NCBI ID   WP_002114040.1    Uniprot ID   K9CH03
Organism   Acinetobacter pittii strain 2014S07-126     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3695022..3706155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7573_RS17640 (Q7573_17715) - 3695278..3695484 (-) 207 WP_002114054.1 hypothetical protein -
  Q7573_RS17645 (Q7573_17720) oprC 3695538..3697652 (-) 2115 WP_002114079.1 TonB-dependent copper receptor -
  Q7573_RS17650 (Q7573_17725) - 3697725..3698150 (-) 426 WP_002114087.1 DUF2946 family protein -
  Q7573_RS17655 (Q7573_17730) def 3698194..3698724 (-) 531 WP_002114101.1 peptide deformylase -
  Q7573_RS17660 (Q7573_17735) tsaP 3698847..3700001 (+) 1155 WP_002114134.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Q7573_RS17665 (Q7573_17740) dprA 3700022..3701155 (+) 1134 WP_002114040.1 DNA-processing protein DprA Machinery gene
  Q7573_RS17670 (Q7573_17745) yrdC 3701207..3701776 (+) 570 WP_002114056.1 Sua5/YciO/YrdC/YwlC family protein -
  Q7573_RS17675 (Q7573_17750) - 3702169..3703089 (-) 921 WP_002114137.1 DMT family transporter -
  Q7573_RS17680 (Q7573_17755) - 3703193..3703846 (-) 654 WP_078210243.1 TetR/AcrR family transcriptional regulator -
  Q7573_RS17685 (Q7573_17760) nepI 3703982..3705196 (+) 1215 WP_002114107.1 MFS transporter -
  Q7573_RS17690 (Q7573_17765) yeaM 3705218..3705982 (+) 765 WP_002114047.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 377 a.a.        Molecular weight: 41981.56 Da        Isoelectric Point: 6.6297

>NTDB_id=865699 Q7573_RS17665 WP_002114040.1 3700022..3701155(+) (dprA) [Acinetobacter pittii strain 2014S07-126]
MLTQLYSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAELSQWRNLGLHANHLKRVDEFQTAQGQAQFKKLTEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=865699 Q7573_RS17665 WP_002114040.1 3700022..3701155(+) (dprA) [Acinetobacter pittii strain 2014S07-126]
ATGCTTACTCAACTTTATTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGAATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTAAAAAACTAACTGAGCAAATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGTCAGGCACAAGCCCTATTACAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGG
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAGTTTTTGCCTGGGACAC
CTCCACTACAACAGCATTTCCCACGTAGAAACCGAATTGTTAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAGTGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(86-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB K9CH03

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.451

100

0.905
  dprA Acinetobacter baumannii strain A118

89.92

100

0.899
  dprA Acinetobacter baylyi ADP1

70.604

100

0.714
  dprA Vibrio cholerae strain A1552

43.228

92.042

0.398