Detailed information NTG0865629

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q7574_RS09630
• Genome accession: NZ_CP131867
• Coordinates: 2017067..2017882 (-)
• Length: 271 a.a.
• NCBI ID: WP_174723748.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain 2012N08-034
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2012067..2022882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7574_RS09600 (Q7574_09645)	-	2012366..2012806 (-)	441	WP_014206600.1	SRPBCC family protein	-
Q7574_RS09605 (Q7574_09650)	tadA	2012877..2013389 (-)	513	WP_342063016.1	tRNA adenosine(34) deaminase TadA	-
Q7574_RS09610 (Q7574_09655)	hibch	2013395..2014519 (-)	1125	WP_206260669.1	enoyl-CoA hydratase/isomerase family protein	-
Q7574_RS09615 (Q7574_09660)	ung	2014516..2015229 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
Q7574_RS09620 (Q7574_09665)	-	2015283..2015879 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
Q7574_RS09625 (Q7574_09670)	gspK	2016107..2017066 (-)	960	WP_017482270.1	type II secretion system minor pseudopilin GspK	-
Q7574_RS09630 (Q7574_09675)	xcpW	2017067..2017882 (-)	816	WP_174723748.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q7574_RS09635 (Q7574_09680)	xcpV	2017882..2018262 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q7574_RS09640 (Q7574_09685)	-	2018252..2018806 (-)	555	WP_002121405.1	type II secretion system protein	-
Q7574_RS09645 (Q7574_09690)	-	2018813..2019421 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
Q7574_RS09650 (Q7574_09695)	ycfH	2019458..2020231 (-)	774	WP_005069538.1	TatD family hydrolase	-
Q7574_RS09655 (Q7574_09700)	pilZ	2020249..2020590 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
Q7574_RS09660 (Q7574_09705)	holB	2020601..2021581 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
Q7574_RS09665 (Q7574_09710)	kdsB	2021595..2022356 (-)	762	WP_174723750.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30903.38 Da
• Isoelectric Point: 9.8258

>NTDB_id=865629 Q7574_RS09630 WP_174723748.1 2017067..2017882(-) (xcpW) [Acinetobacter pittii strain 2012N08-034]
MIKNKCFRYPSSASRLAVRSEQMMRGYSEQSSSSCAQTKLCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSALLSQVEQFQIMVLTPQEVTKWPEVNIDSTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=865629 Q7574_RS09630 WP_174723748.1 2017067..2017882(-) (xcpW) [Acinetobacter pittii strain 2012N08-034]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTTGTTTTAAAGACTCTCACACTCGAAACATAGTCTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTGCAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCGTTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTAAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTGCGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACTCTACAAAACCTGATGAATTTAGGAAATTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	87.556	83.026	0.727