Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   Q7574_RS03395 Genome accession   NZ_CP131867
Coordinates   689573..694102 (+) Length   1509 a.a.
NCBI ID   WP_151282724.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 2012N08-034     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 684573..699102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7574_RS03370 (Q7574_03370) - 685012..685650 (-) 639 WP_044100316.1 hypothetical protein -
  Q7574_RS03375 (Q7574_03375) pilG 685935..686318 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  Q7574_RS03380 (Q7574_03380) pilH 686342..686704 (+) 363 WP_046811934.1 response regulator -
  Q7574_RS03385 (Q7574_03385) pilI 686761..687297 (+) 537 WP_069124013.1 chemotaxis protein CheW -
  Q7574_RS03390 (Q7574_03390) - 687344..689425 (+) 2082 WP_068565018.1 methyl-accepting chemotaxis protein -
  Q7574_RS03395 (Q7574_03395) chpA 689573..694102 (+) 4530 WP_151282724.1 Hpt domain-containing protein Regulator
  Q7574_RS03400 (Q7574_03400) - 694099..694566 (+) 468 WP_069124007.1 hypothetical protein -
  Q7574_RS03405 (Q7574_03405) - 694871..695752 (+) 882 WP_069124005.1 alpha/beta fold hydrolase -
  Q7574_RS03410 (Q7574_03410) dapE 695887..697023 (-) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  Q7574_RS03415 (Q7574_03415) - 697150..697293 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  Q7574_RS03420 (Q7574_03420) - 697417..698298 (-) 882 WP_069124004.1 DUF1853 family protein -
  Q7574_RS03425 (Q7574_03425) - 698402..698770 (+) 369 WP_017400240.1 YbaN family protein -

Sequence


Protein


Download         Length: 1509 a.a.        Molecular weight: 172183.81 Da        Isoelectric Point: 4.3334

>NTDB_id=865625 Q7574_RS03395 WP_151282724.1 689573..694102(+) (chpA) [Acinetobacter pittii strain 2012N08-034]
MKEILKTLTEAMMLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMRSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETITGLELDYLEQDSLAESIVEDVHTEIEINLNETLALFMEEAEEHLSTINQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEQLFKILLQEELSSNSDEILLLQEYRDFIGESLELLSSNSSSEQLEVRLEQFNQSWDVYVEE
HSDRTDPLMPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPGYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKDSYNV
LLDKPVLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSIQNDLSQQNFTFDESLFNIEL
ESEVPEVIRVENSSDSADWTLLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGMDTDLNIWINDQENFAALNN
LMRYLHTLKGGANMIQATYIGLIAHELESIYERLIQRQLIASSALIDFIRLVQDDLADRLQIMREKQLDYEAYYTINALK
RAGQNSNFQSAPEIEASDIEREIFSEQEVISEVLIDEVPAEIEAVIEELEAHHDQVFDTVVTELTAPVEAITSVVSSHEN
DALVDEEDITAVVEQTFLEEAAELLEMADMLLKQWFDQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENAFEQ
FALHHFNSNIYDHLLESAIAWLKDAIFKYNYQHFDGLQQSLENIQFFETNIQIPAKLSKADLFSSEPVMTFIQGDGTEPP
PMMGAWEQTQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQII
AKHGIEHSRYTEFDPLEMDRYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSR
LLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRVQRQQAQKPETGRIELNIHRQG
TDVVVTFKDDGRGIDIEKVRQKALMFGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVS
VESVYGQGTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSVQEFFEFENKRYPLRYLSEFVG
SQPIPRLSGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQI
QSTRRLKLVNEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMD
GFEVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4530 bp        

>NTDB_id=865625 Q7574_RS03395 WP_151282724.1 689573..694102(+) (chpA) [Acinetobacter pittii strain 2012N08-034]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCGTCGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTGCTAAATGAATGGATGCGGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCATACCTTAAAAGGTTCTGGGAGAATGATTGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTCAATCGAGTAATCAATCAAAGCCTTAAGTTGACTCCAGCTATCCAGAGTTA
TGTTCAGTTAGTGTTTAAGTTCTATTTCCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTA
GACCGCTTATTTTATTGGGACAACAATTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATAACTGGACTTGAGCTAGACTATCTTGAGCAAGATTCATTGGCTGAGTCAATTGTTGA
AGATGTACATACTGAAATTGAAATAAATCTAAATGAAACCTTAGCCTTATTTATGGAAGAAGCGGAGGAGCATTTATCGA
CAATTAATCAGTTCTTAAATCAAGAGCTACATCAGTATGATAGTTACAATGCTTTAATACGTGCTCTACATACTTTGCGT
GGCAGTTCTGCAATGGCGCAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCAGTTATTTAAAATCTTATTACA
AGAAGAACTTTCTTCTAATTCAGATGAGATTTTATTATTACAAGAATATCGCGATTTTATTGGAGAGAGCTTAGAGCTGC
TATCTAGCAATAGTTCAAGTGAACAGCTTGAAGTGAGATTAGAGCAGTTTAATCAATCATGGGATGTCTACGTTGAGGAG
CATAGTGATCGAACAGATCCATTAATGCCTTCACATGGTTTGGTATCGCAATTATTACTGTTAGATGTTTCTGAGCTACT
CGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAACGAGTTTCCTGGTTATCTTGAACGTCTAAGTGAACAGGCTGATT
TGTTGCTACAGCATACCCACTCTCAAGCAATGCTAGGTTTACATGAATATACGAGCCAATTGAAAGACAGCTATAATGTA
TTGCTTGATAAACCTGTGTTATTGCAATCGGACTATATTTTTGAAATTTATCAAAAAGCGCATCAACAACTTATTCAATT
GTTCGATGCTTTAGCCGCTGGTCAGCGAGTCGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CGCTACATACACCTAGTATTCAAAATGATTTATCTCAGCAGAATTTTACTTTTGATGAGTCACTATTCAATATTGAACTA
GAGTCTGAAGTTCCAGAAGTTATTAGAGTAGAGAATTCATCAGACTCTGCTGACTGGACCCTATTAAGCCAAAGTGTACA
GCAAGATCGTCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCAGATCTATTAGACATTTTCCTCGAAGAAG
CTGATGAGTTGCTTGAAGGAATGGATACAGATCTTAATATTTGGATTAATGATCAAGAGAACTTTGCGGCTCTCAATAAT
TTGATGCGTTATTTGCATACCTTAAAAGGTGGAGCAAATATGATCCAAGCAACTTATATTGGCTTAATTGCACATGAATT
GGAAAGTATTTATGAGCGCTTAATTCAAAGACAGCTAATAGCTTCATCTGCTCTGATTGATTTTATACGTCTGGTTCAAG
ATGACTTGGCTGACCGTCTACAAATCATGCGTGAAAAACAGCTAGATTATGAAGCTTATTACACAATTAACGCATTGAAA
AGAGCAGGTCAAAACTCTAACTTCCAATCTGCACCTGAGATTGAAGCATCTGATATTGAACGTGAGATATTCTCTGAACA
AGAGGTGATATCTGAAGTATTAATAGATGAAGTACCGGCAGAAATTGAAGCTGTTATTGAAGAATTAGAAGCTCATCACG
ATCAAGTATTTGATACAGTTGTTACTGAATTGACTGCGCCAGTTGAAGCAATAACATCAGTTGTATCGTCGCACGAGAAT
GACGCTCTGGTTGATGAAGAGGACATTACTGCTGTTGTTGAGCAGACATTCCTCGAAGAAGCTGCTGAATTGTTAGAAAT
GGCTGATATGCTATTGAAACAATGGTTTGATCAGCGTACGAATCGTAGTATCTTGCTTCAATTACAAAGGGCCGTGCACA
GCTTGAAGGGTGGTGCACGAATGGTTGGTTTAGAAGCCGTGTATGCGATTGCCTATCAACTTGAGAATGCTTTTGAACAA
TTTGCACTACATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGACGCAATTTT
CAAGTACAACTACCAGCATTTCGATGGACTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTC
CAGCTAAGTTAAGTAAAGCTGATTTGTTTAGCTCAGAACCCGTGATGACCTTTATACAAGGTGATGGTACAGAACCACCG
CCAATGATGGGAGCATGGGAACAAACTCAACGGCTCGATCAAAATAATGAGATGATCCGAGTTTCGGCAGATTTAATTGA
AAAAATGATTGATCTGTCGGGTGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGACATACGC
TAGCGGAAATGGAATTGGCCATTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGTGAATTGGAAACCCAAATTATT
GCAAAACACGGTATTGAGCACTCTCGATATACGGAGTTTGATCCGTTAGAGATGGATCGATATTCGTCTTTAAATCAATT
ATCAAAATCTCTTGCTGAATCTGCATCGGATTTGGTCGACTTTAAAAATACATTATCTGACAAAATCAGAGATACAGAAA
GCTTACTTTTACAACAGTCACGGATTCAAGCAGAAATTCAAGAAGGTTTGATGCGAACGCGATTAGTACCTTTCTCTCGA
TTACTGCCGCGTTTACAGCGAATTGTCCGTCAGACATCTACAGCTTTGAACAGACCTGCAGAGCTTTTTGTAAATAATAC
CGAAGGTGAGTTAGATCGCAATATTTTAGAACGGTTAGTGACCCCGCTTGAGCATATGCTCAGAAATGCAATTGACCATG
GTCTAGAAGATCGCGTGCAACGTCAACAAGCACAAAAACCAGAAACTGGACGTATTGAACTTAATATCCATCGTCAAGGT
ACAGATGTTGTTGTGACATTTAAGGATGATGGAAGAGGTATTGATATCGAAAAGGTTCGTCAAAAGGCATTGATGTTTGG
TTTAATTAATCCTGAACAAGTATTGGAACATCAAGATATTTTACAGTTGATTTTCCATCCGGGTTTAAGTACAGCTGATC
AAGTTACTCAAATTTCAGGTCGTGGTGTAGGACTGGATGTAGTACAAAGTGATATTAAGGCTCTAGGTGGCCATGTGAGC
GTAGAGTCTGTGTATGGGCAGGGAACGGTCTTTACAATACGTGTTCCAACTACAGTAGCGGTTAGTGATGCCTTAATGGT
TAAAGTTGCTGATCAGCAATTTGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCACCTGCATCATTAGAAC
AATATTTTGGAAGCGTACAAGAATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGT
AGTCAACCAATTCCGCGTTTAAGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGT
CGCATTATTAGTTGACCAACTGATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCG
GTGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATT
CAGTCTACTCGTCGACTTAAGCTGGTTAATGAAGCGGTTTATAGACAACGAGAGTCTGATGAGCGACGTCTCATCATGAT
TGTGGATGACTCAGTAACTGTACGTAAAGTAACCTCTCGTTTACTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAG
ATGGTGTGGATGCTATAGAGCAGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGAT
GGTTTTGAAGTTCTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCCGAACAGG
TGAAAAACATCGTGAACGAGCATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAGGAAGAGTTATTAG
AGAATATCGATGCTTTACTTGTGGCGTTTGAAAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

89.331

100

0.893