Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   Q7574_RS02460 Genome accession   NZ_CP131867
Coordinates   497738..498622 (+) Length   294 a.a.
NCBI ID   WP_151282637.1    Uniprot ID   -
Organism   Acinetobacter pittii strain 2012N08-034     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 492738..503622
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7574_RS02435 (Q7574_02435) - 493052..494299 (-) 1248 WP_342063592.1 YihY family inner membrane protein -
  Q7574_RS02440 (Q7574_02440) wrbA 494661..495263 (+) 603 WP_197738964.1 NAD(P)H:quinone oxidoreductase -
  Q7574_RS02445 (Q7574_02445) xpt 495315..495890 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  Q7574_RS02450 (Q7574_02450) - 495963..496676 (-) 714 WP_086399109.1 DUF3108 domain-containing protein -
  Q7574_RS02455 (Q7574_02455) - 496834..497505 (-) 672 WP_086265329.1 hypothetical protein -
  Q7574_RS02460 (Q7574_02460) tonB2 497738..498622 (+) 885 WP_151282637.1 TonB family protein Machinery gene
  Q7574_RS02465 (Q7574_02465) ybeY 498675..499151 (-) 477 WP_342063593.1 rRNA maturation RNase YbeY -
  Q7574_RS02470 (Q7574_02470) phoL 499161..500249 (-) 1089 WP_004705435.1 PhoH family protein -
  Q7574_RS02475 (Q7574_02475) miaB 500287..501738 (-) 1452 WP_046813479.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33610.27 Da        Isoelectric Point: 9.1531

>NTDB_id=865623 Q7574_RS02460 WP_151282637.1 497738..498622(+) (tonB2) [Acinetobacter pittii strain 2012N08-034]
MLNKRSLSIESFHYWWKDRVFIAATILAILLHILVLLIHFAMPSPSEQSTKEIAISIRPTNEPVVQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGNAELETLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKRELEQLQSQFQAKAALVAS
LEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=865623 Q7574_RS02460 WP_151282637.1 497738..498622(+) (tonB2) [Acinetobacter pittii strain 2012N08-034]
ATGTTGAACAAAAGAAGTCTATCTATAGAGTCTTTTCATTATTGGTGGAAAGACCGAGTCTTTATTGCTGCAACAATATT
AGCAATCTTACTGCATATTCTTGTATTGCTCATTCACTTTGCTATGCCTAGCCCATCAGAGCAGTCTACTAAAGAAATTG
CAATTTCAATTCGACCAACCAATGAGCCAGTTGTTCAGGCAGATTTTTTGGCACAAGCAGACCAGCAGGGTTCAGGTGCA
TTTCGTGAGGCTCACCGGACTTCTAGTGATACTCCCAATCCGATGCTTAATGATGCTTCAACGGGGAATGCAGAGTTAGA
AACTTTGCAAAAGATTCAGCAACAACGAGAGCTTAAATTTGAAGAAAAAGTTCTAATGACGGTTTTAAGTTGGCAGAAAC
AAGCTGATGCAAGTCAAAGGAAAAGGGAATTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGTTGGTTGCGAGC
CTTGAAGCACAATATTTACAACGTAGACAAGATTTTAGTCGCCAGCAAAAAATAAAAACAGTGGATGGAATTCAAGCGAA
GAAAGATGCTTCAGCTATTTATTTAGATAAGTTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTATCCCGAAGAAG
CGAAACAGCAGCAGCTCAAAGGTGAAGTTCGTTTAATGGTGATTTTGAACGCTCAAGGCGGAATTCGTGCAATCCGTTTG
CTTGAAAGCTCAGGGCATTCAATACTTGATGAGGCTGCAAAGTCTTCAGTACGTCGCGGTGCGCCATTTGGGCATTTTGA
TGCAAATATGAAAGATATTTCGGAGTTACGTATTGTTCGTACTTGGCGTTTTGATCCAGCGGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881