Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   Q7591_RS27010 Genome accession   NZ_CP131783
Coordinates   5638649..5639173 (+) Length   174 a.a.
NCBI ID   WP_003116261.1    Uniprot ID   Q7WZP2
Organism   Pseudomonas aeruginosa strain 2016C02-074     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5633649..5644173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7591_RS26990 (Q7591_26990) pilR 5634906..5636248 (+) 1343 Protein_5336 two-component system response regulator PilR -
  Q7591_RS26995 (Q7591_26995) thiO 5636294..5637388 (-) 1095 WP_023110413.1 glycine oxidase ThiO -
  Q7591_RS27000 (Q7591_27000) - 5637528..5638028 (+) 501 WP_034069421.1 GspH/FimT family pseudopilin -
  Q7591_RS27005 (Q7591_27005) - 5638151..5638639 (+) 489 WP_003141552.1 GspH/FimT family pseudopilin -
  Q7591_RS27010 (Q7591_27010) pilV 5638649..5639173 (+) 525 WP_003116261.1 type IV pilus modification protein PilV Machinery gene
  Q7591_RS27015 (Q7591_27015) - 5639182..5639997 (+) 816 WP_003116262.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  Q7591_RS27020 (Q7591_27020) - 5639994..5640599 (+) 606 WP_003116263.1 pilus assembly protein -
  Q7591_RS27025 (Q7591_27025) - 5640613..5644089 (+) 3477 WP_023100239.1 PilC/PilY family type IV pilus protein -

Sequence

Protein


Download         Length: 174 a.a.        Molecular weight: 18763.51 Da        Isoelectric Point: 4.9113

>NTDB_id=865010 Q7591_RS27010 WP_003116261.1 5638649..5639173(+) (pilV) [Pseudomonas aeruginosa strain 2016C02-074]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL

Nucleotide


Download         Length: 525 bp        

>NTDB_id=865010 Q7591_RS27010 WP_003116261.1 5638649..5639173(+) (pilV) [Pseudomonas aeruginosa strain 2016C02-074]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCTGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(1-26)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Pseudomonas aeruginosa PAK

59.429

100

0.598