Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   Q7611_RS02165 Genome accession   NZ_CP131723
Coordinates   427261..427557 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae strain 2018C08-260     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 422261..432557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7611_RS02145 (Q7611_02150) - 423789..423902 (+) 114 Protein_408 PT domain-containing protein -
  Q7611_RS02150 (Q7611_02155) - 423859..424404 (+) 546 Protein_409 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  Q7611_RS02155 (Q7611_02160) - 424564..426816 (+) 2253 WP_342122512.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  Q7611_RS02160 (Q7611_02165) - 427086..427268 (+) 183 WP_005654546.1 shikimate 5-dehydrogenase -
  Q7611_RS02165 (Q7611_02170) HI0659 427261..427557 (+) 297 WP_005650837.1 helix-turn-helix transcriptional regulator Machinery gene
  Q7611_RS02170 (Q7611_02175) - 427724..429640 (+) 1917 WP_105874701.1 ABC transporter ATP-binding protein -
  Q7611_RS02175 (Q7611_02180) - 429650..430186 (+) 537 WP_042601579.1 type I DNA topoisomerase -
  Q7611_RS02180 (Q7611_02185) - 430202..430753 (+) 552 WP_042601577.1 Sua5/YciO/YrdC/YwlC family protein -
  Q7611_RS02185 (Q7611_02190) aroE 430757..431563 (+) 807 WP_042601575.1 shikimate dehydrogenase -
  Q7611_RS02190 (Q7611_02195) - 431575..432327 (+) 753 WP_042601573.1 DUF3800 domain-containing protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=864783 Q7611_RS02165 WP_005650837.1 427261..427557(+) (HI0659) [Haemophilus influenzae strain 2018C08-260]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=864783 Q7611_RS02165 WP_005650837.1 427261..427557(+) (HI0659) [Haemophilus influenzae strain 2018C08-260]
ATGAATAAAATTAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGTCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGCTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1