Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   WHO32_RS22125 Genome accession   NZ_CP148112
Coordinates   4204105..4204953 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis isolate FELIX_MS504     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4199105..4209953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO32_RS22105 yyaE 4199619..4201622 (-) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -
  WHO32_RS22110 yyzM 4201673..4201879 (-) 207 WP_003226838.1 DUF951 family protein -
  WHO32_RS22115 - 4201973..4202989 (-) 1017 WP_010886647.1 membrane protein -
  WHO32_RS22120 yyaC 4203449..4204066 (+) 618 WP_003243890.1 spore protease YyaC -
  WHO32_RS22125 spo0J 4204105..4204953 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  WHO32_RS22130 soj 4204946..4205707 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  WHO32_RS22135 yyaB 4205955..4206395 (+) 441 WP_003244005.1 PH domain-containing protein -
  WHO32_RS22140 noc 4206446..4207297 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  WHO32_RS22145 rsmG 4207419..4208138 (-) 720 WP_003243029.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=864697 WHO32_RS22125 WP_003226832.1 4204105..4204953(-) (spo0J) [Bacillus subtilis isolate FELIX_MS504]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=864697 WHO32_RS22125 WP_003226832.1 4204105..4204953(-) (spo0J) [Bacillus subtilis isolate FELIX_MS504]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387