Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   WHO32_RS05610 Genome accession   NZ_CP148112
Coordinates   1077024..1077767 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis isolate FELIX_MS504     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1072024..1082767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHO32_RS05575 yhaI 1072352..1072693 (+) 342 WP_009966921.1 YhaI family protein -
  WHO32_RS05580 scoC 1072690..1073301 (-) 612 WP_003239501.1 HTH-type transcriptional regulator Hpr -
  WHO32_RS05585 yhaH 1073479..1073835 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  WHO32_RS05590 - 1073965..1074156 (+) 192 WP_003233238.1 hypothetical protein -
  WHO32_RS05595 trpP 1074230..1074748 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  WHO32_RS05600 serC 1074873..1075952 (-) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  WHO32_RS05605 hinT 1076099..1076536 (-) 438 WP_003233231.1 HIT family protein -
  WHO32_RS05610 pptA 1077024..1077767 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  WHO32_RS05615 ecsB 1077760..1078986 (+) 1227 WP_003245169.1 ABC transporter permease EcsB -
  WHO32_RS05620 ecsC 1079006..1079716 (+) 711 WP_003233225.1 EcsC family protein -
  WHO32_RS05625 sndC 1079734..1080924 (-) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  WHO32_RS05630 - 1080997..1082388 (-) 1392 WP_003233218.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=864579 WHO32_RS05610 WP_003233230.1 1077024..1077767(+) (pptA) [Bacillus subtilis isolate FELIX_MS504]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=864579 WHO32_RS05610 WP_003233230.1 1077024..1077767(+) (pptA) [Bacillus subtilis isolate FELIX_MS504]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547