Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   WHL98_RS22110 Genome accession   NZ_CP148104
Coordinates   4206409..4207257 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4201409..4212257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS22090 yyaE 4201923..4203926 (-) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -
  WHL98_RS22095 yyzM 4203977..4204183 (-) 207 WP_003226838.1 DUF951 family protein -
  WHL98_RS22100 - 4204277..4205293 (-) 1017 WP_010886647.1 membrane protein -
  WHL98_RS22105 yyaC 4205753..4206370 (+) 618 WP_003243890.1 spore protease YyaC -
  WHL98_RS22110 spo0J 4206409..4207257 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  WHL98_RS22115 soj 4207250..4208011 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  WHL98_RS22120 yyaB 4208259..4208699 (+) 441 WP_003244005.1 PH domain-containing protein -
  WHL98_RS22125 noc 4208750..4209601 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  WHL98_RS22130 rsmG 4209723..4210442 (-) 720 WP_003243029.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=864293 WHL98_RS22110 WP_003226832.1 4206409..4207257(-) (spo0J) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=864293 WHL98_RS22110 WP_003226832.1 4206409..4207257(-) (spo0J) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387