Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   WHL98_RS21365 Genome accession   NZ_CP148104
Coordinates   4073136..4073825 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. subtilis isolate FELIX_MS438     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4068136..4078825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL98_RS21345 yxeA 4069041..4069388 (-) 348 WP_003227084.1 YxeA family protein -
  WHL98_RS21350 yxdM 4069402..4071270 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  WHL98_RS21355 yxdL 4071245..4072018 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  WHL98_RS21360 yxdK 4072162..4073139 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  WHL98_RS21365 braR 4073136..4073825 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  WHL98_RS21370 iolJ 4073933..4074805 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  WHL98_RS21375 iolI 4074826..4075662 (-) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  WHL98_RS21380 iolH 4075748..4076617 (-) 870 WP_003243149.1 sugar phosphate isomerase/epimerase -
  WHL98_RS21385 iolG 4076637..4077671 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=864288 WHL98_RS21365 WP_003243527.1 4073136..4073825(-) (braR) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=864288 WHL98_RS21365 WP_003243527.1 4073136..4073825(-) (braR) [Bacillus subtilis subsp. subtilis isolate FELIX_MS438]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406