Detailed information NTG0864070

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: Q7624_RS09790
• Genome accession: NZ_CP131709
• Coordinates: 1883263..1883667 (-)
• Length: 134 a.a.
• NCBI ID: WP_061763003.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2016S11-245
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1878263..1888667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7624_RS09750 (Q7624_09725)	rnpA	1878684..1879055 (-)	372	WP_000739246.1	ribonuclease P protein component	-
Q7624_RS09755 (Q7624_09730)	-	1879072..1879203 (-)	132	WP_000768904.1	hypothetical protein	-
Q7624_RS09760 (Q7624_09735)	-	1879204..1880394 (-)	1191	WP_000167766.1	acetate kinase	-
Q7624_RS09765 (Q7624_09740)	comYH	1880445..1881398 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
Q7624_RS09770 (Q7624_09745)	-	1881459..1882046 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
Q7624_RS09775 (Q7624_09750)	comGG/cglG	1882183..1882596 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
Q7624_RS09780 (Q7624_09755)	comGF/cglF	1882574..1883035 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
Q7624_RS09785 (Q7624_09760)	comGE/cglE	1882998..1883300 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
Q7624_RS09790 (Q7624_09765)	comGD/cglD	1883263..1883667 (-)	405	WP_061763003.1	competence type IV pilus minor pilin ComGD	Machinery gene
Q7624_RS09795 (Q7624_09770)	comGC/cglC	1883660..1883986 (-)	327	WP_000738650.1	comG operon protein ComGC	Machinery gene
Q7624_RS09800 (Q7624_09775)	comGB/cglB	1883988..1885004 (-)	1017	WP_013193332.1	competence type IV pilus assembly protein ComGB	Machinery gene
Q7624_RS09805 (Q7624_09780)	comGA/cglA/cilD	1884952..1885893 (-)	942	WP_000249567.1	competence type IV pilus ATPase ComGA	Machinery gene
Q7624_RS09810 (Q7624_09785)	-	1885969..1886334 (-)	366	WP_000286415.1	DUF1033 family protein	-
Q7624_RS09815 (Q7624_09790)	-	1886485..1887543 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14567.70 Da
• Isoelectric Point: 10.0326

>NTDB_id=864070 Q7624_RS09790 WP_061763003.1 1883263..1883667(-) (comGD/cglD) [Streptococcus pneumoniae strain 2016S11-245]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDSAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=864070 Q7624_RS09790 WP_061763003.1 1883263..1883667(-) (comGD/cglD) [Streptococcus pneumoniae strain 2016S11-245]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACAGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae Rx1	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae D39	95.522	100	0.955
comGD/cglD	Streptococcus pneumoniae R6	95.522	100	0.955
comGD/cglD	Streptococcus mitis NCTC 12261	95.489	99.254	0.948
comGD/cglD	Streptococcus mitis SK321	94.776	100	0.948
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478