Detailed information NTG0863735

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: WDR08_RS12185
• Genome accession: NZ_CP148035
• Coordinates: 2531498..2532523 (-)
• Length: 341 a.a.
• NCBI ID: WP_338859538.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain S1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2526498..2537523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDR08_RS12160 (WDR08_12160)	aroE	2526700..2527524 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
WDR08_RS12165 (WDR08_12165)	hemF	2527582..2528499 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
WDR08_RS12170 (WDR08_12170)	-	2528690..2529667 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
WDR08_RS12175 (WDR08_12175)	-	2529677..2530234 (-)	558	WP_003097300.1	Sua5/YciO/YrdC/YwlC family protein	-
WDR08_RS12180 (WDR08_12180)	dprA	2530275..2531363 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
WDR08_RS12185 (WDR08_12185)	tsaP	2531498..2532523 (-)	1026	WP_338859538.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
WDR08_RS12190 (WDR08_12190)	def	2532662..2533168 (+)	507	WP_003107059.1	peptide deformylase	-
WDR08_RS12195 (WDR08_12195)	fmt	2533223..2534167 (+)	945	WP_023089593.1	methionyl-tRNA formyltransferase	-
WDR08_RS12200 (WDR08_12200)	rsmB	2534164..2535468 (+)	1305	WP_023092224.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
WDR08_RS12205 (WDR08_12205)	trkA	2535496..2536869 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
WDR08_RS12210 (WDR08_12210)	-	2537018..2537335 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37554.99 Da
• Isoelectric Point: 9.3358

>NTDB_id=863735 WDR08_RS12185 WP_338859538.1 2531498..2532523(-) (tsaP) [Pseudomonas aeruginosa strain S1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGPPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=863735 WDR08_RS12185 WP_338859538.1 2531498..2532523(-) (tsaP) [Pseudomonas aeruginosa strain S1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCCGCCGCGGCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.066	100	0.387