Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   Q7635_RS10600 Genome accession   NZ_CP131670
Coordinates   2116013..2116729 (+) Length   238 a.a.
NCBI ID   WP_000688498.1    Uniprot ID   Q2VG52
Organism   Staphylococcus aureus strain 2004N07-109     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2111013..2121729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7635_RS10570 (Q7635_10565) - 2111230..2111856 (+) 627 WP_000522384.1 nitroreductase family protein -
  Q7635_RS10575 (Q7635_10570) - 2112217..2113002 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  Q7635_RS10580 (Q7635_10575) - 2113602..2113736 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  Q7635_RS10585 (Q7635_10580) - 2113972..2114535 (+) 564 WP_001105696.1 accessory gene regulator ArgB-like protein -
  Q7635_RS10590 (Q7635_10585) - 2114538..2114681 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide -
  Q7635_RS10595 (Q7635_10590) - 2114711..2115994 (+) 1284 WP_234725493.1 GHKL domain-containing protein -
  Q7635_RS10600 (Q7635_10595) agrA 2116013..2116729 (+) 717 WP_000688498.1 LytTR family DNA-binding domain-containing protein Regulator
  Q7635_RS10605 (Q7635_10600) - 2116801..2116910 (+) 110 Protein_2052 hypothetical protein -
  Q7635_RS10610 (Q7635_10605) - 2117098..2118057 (-) 960 WP_103149090.1 carbohydrate kinase -
  Q7635_RS10615 (Q7635_10610) - 2118054..2119538 (-) 1485 WP_103149089.1 sucrose-6-phosphate hydrolase -
  Q7635_RS10620 (Q7635_10615) - 2119687..2120637 (-) 951 WP_341931084.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27933.91 Da        Isoelectric Point: 6.0927

>NTDB_id=863630 Q7635_RS10600 WP_000688498.1 2116013..2116729(+) (agrA) [Staphylococcus aureus strain 2004N07-109]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSRDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=863630 Q7635_RS10600 WP_000688498.1 2116013..2116729(+) (agrA) [Staphylococcus aureus strain 2004N07-109]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGTTTACAATTAT
TATCAAGAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2VG52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996