Detailed information NTG0863458

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: WAE38_RS06160
• Genome accession: NZ_CP147984
• Coordinates: 1198786..1201614 (+)
• Length: 942 a.a.
• NCBI ID: WP_261572723.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain H16SD2BY4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1193786..1206614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAE38_RS06135 (WAE38_06135)	-	1194438..1194716 (+)	279	WP_005712614.1	type II toxin-antitoxin system RelE/ParE family toxin	-
WAE38_RS06140 (WAE38_06140)	-	1194727..1194999 (+)	273	WP_005712616.1	HigA family addiction module antitoxin	-
WAE38_RS06145 (WAE38_06145)	rhlB	1195063..1196283 (+)	1221	WP_021112303.1	ATP-dependent RNA helicase RhlB	-
WAE38_RS06150 (WAE38_06150)	-	1196293..1197780 (+)	1488	WP_078208823.1	helicase HerA-like C-terminal domain-containing protein	-
WAE38_RS06155 (WAE38_06155)	ssb	1197941..1198483 (-)	543	WP_021115958.1	single-stranded DNA-binding protein	Machinery gene
WAE38_RS06160 (WAE38_06160)	uvrA	1198786..1201614 (+)	2829	WP_261572723.1	excinuclease ABC subunit UvrA	Machinery gene
WAE38_RS06165 (WAE38_06165)	-	1201698..1202078 (+)	381	WP_010786782.1	YacL family protein	-
WAE38_RS06170 (WAE38_06170)	-	1202155..1205658 (-)	3504	WP_338823093.1	ESPR-type extended signal peptide-containing protein	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104529.03 Da
• Isoelectric Point: 6.6453

>NTDB_id=863458 WAE38_RS06160 WP_261572723.1 1198786..1201614(+) (uvrA) [Glaesserella parasuis strain H16SD2BY4]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDMSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRTCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMASDHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPIGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAYFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=863458 WAE38_RS06160 WP_261572723.1 1198786..1201614(+) (uvrA) [Glaesserella parasuis strain H16SD2BY4]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACTCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGTCAGTTCTTGTCTTTAATGGAAAAGCCTGATGTCGATCACATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCACACAATCCTCGTTCTACGGTAGGGACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACAATTTCGC
AAATGGTGGATAGAGTTCTGGAAGAGCCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCAAAACTTGAATTGCAGAAAAAACATACGATTGAAGTGGTAATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCCGAGTCCTTTGAAACGGCATTGGAACTCTCAGGTTCAACAGCGATTATTGCCGATATGGACGATCCA
AATGCAGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACGGAATTAGAGCCACGTCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAATCCTGATATGTCCTTAGCAAGCGGTGCGATTAAGGGTTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAATATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGGTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTACTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTGTCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGTGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATTGGTGCTGGATTAGTGGGAGT
GATGTATGTGCTTGATGAACCGTCTATTGGCTTGCACCAACGAGATAATGAACGTTTACTAAACACGCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGCGTCGGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGTGGGCAGATTATTGCTCAGGGTACGGCTCAAGAAATTATGCAAAATGAAGCATCAATTAC
GGGCAAATTCTTATCGGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGGGCGAGCGGTAATAACTTGAAAGAAGTCGATTTAGCTATTCCTATCGGTCTGTTTACTTGTATTACGGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAACCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGACGGATTGGCTTATTTCGACAAAGTGATCGACATCAATCAAAGCCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGCTATACTGTCGGGCGTTTCAGCTTTAATGTGCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCTATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCCAAACGTGACACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACAGGATTACACTTCGCCGACATTAAACAATTATTGACCGTATTGCACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACGGCAGACTGGATTGTCGATCTAGGTCCTGAAGG
CGGTAGCGGTGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.869	99.682	0.567
uvrA	Streptococcus pneumoniae TIGR4	56.869	99.682	0.567
uvrA	Streptococcus pneumoniae D39	56.869	99.682	0.567