Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   WAB15_RS24245 Genome accession   NZ_CP147982
Coordinates   5349180..5350913 (+) Length   577 a.a.
NCBI ID   WP_407287525.1    Uniprot ID   A0ABZ2QQK5
Organism   Streptomyces sp. BP-8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5344180..5355913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WAB15_RS24210 (WAB15_24185) - 5344449..5344679 (-) 231 WP_384486793.1 hypothetical protein -
  WAB15_RS24215 (WAB15_24190) - 5344891..5345178 (-) 288 WP_030660503.1 DUF1416 domain-containing protein -
  WAB15_RS24220 (WAB15_24195) - 5345221..5346066 (-) 846 WP_399148698.1 sulfurtransferase -
  WAB15_RS24225 - 5346281..5346388 (-) 108 WP_393488412.1 putative leader peptide -
  WAB15_RS24230 (WAB15_24200) - 5346615..5347313 (-) 699 WP_399148697.1 DUF2993 domain-containing protein -
  WAB15_RS24235 (WAB15_24205) - 5347542..5348714 (-) 1173 WP_407287524.1 hypothetical protein -
  WAB15_RS24240 (WAB15_24210) - 5348725..5348970 (-) 246 WP_393488526.1 MoaD/ThiS family protein -
  WAB15_RS24245 (WAB15_24215) rcrP 5349180..5350913 (+) 1734 WP_407287525.1 ABC transporter ATP-binding protein Regulator
  WAB15_RS24250 (WAB15_24220) rcrQ 5351024..5352925 (+) 1902 WP_407289284.1 ABC transporter ATP-binding protein Regulator
  WAB15_RS24255 (WAB15_24225) - 5353297..5353995 (+) 699 WP_399148694.1 DUF3800 domain-containing protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 63028.47 Da        Isoelectric Point: 6.5126

>NTDB_id=863410 WAB15_RS24245 WP_407287525.1 5349180..5350913(+) (rcrP) [Streptomyces sp. BP-8]
MLVRLARAHLRPHKRSISLIVLLQLIQTLATLYLPTLNADIIDNGVVKGDAGYILRIGGYMTAVTLLQIVCAIAAVYFGA
RTAMALGRDIRLAVFDRVQSFSAREVGTFGAPSLITRTTNDVQQVQMLVLMTFTMMVSAPIMCVGGVVMALNQDVPLSAL
LLVIVPVLGILVSLIVRRMRPLFRGVQERIDTVNRVLREQIAGIRVIRAFVRDTHERERFAGANTDLYDVSMRAGRLMSM
MFPLVMLIMNLSSVAVVWFGGLRIDGGDMQIGAMTAFLSYLMYILMSIMMATFMVMMLPRAEVCAERIQEVLATDSSVVP
PAHPVTELRRHGELELRDVEFRFPGAEQPVLKDISLTARPGETTAVIGSTGSGKSTLLGLVPRLFDATGGTVLVDGVDVR
TLDPETLARTIGLVPQKPYLFSGTVAGNLRYGNPDATDEELWHALETAQARDFVERMDGGLDAPVAQGGSNVSGGQRQRL
AIARALVRRPEIYLFDDSFSALDYATDAALRAALSHETDRATVVIVAQRVSTIRGADRIVVLDEGRVVGTGTHTELMADN
ETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=863410 WAB15_RS24245 WP_407287525.1 5349180..5350913(+) (rcrP) [Streptomyces sp. BP-8]
GTGTTGGTCCGACTCGCGCGGGCGCATCTGCGGCCCCACAAGCGCTCGATATCCCTGATCGTGCTCCTGCAGCTGATCCA
GACCCTGGCGACCCTCTACCTGCCCACCCTCAACGCCGACATCATCGACAACGGTGTCGTCAAGGGGGACGCGGGCTACA
TCCTCCGCATCGGCGGCTACATGACCGCCGTGACCCTGCTGCAGATCGTCTGCGCGATCGCCGCCGTCTACTTCGGTGCC
CGTACGGCCATGGCGCTCGGCCGCGACATCCGCCTCGCGGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGGGAGGTCGG
GACGTTCGGCGCCCCGTCGCTGATCACCCGCACCACCAACGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGACGTTCA
CGATGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGCGTCGTCATGGCGCTCAACCAGGACGTTCCGCTGTCCGCCCTG
CTACTGGTCATCGTCCCGGTCCTCGGGATCCTCGTCTCACTGATCGTGCGCCGGATGCGCCCGCTCTTCCGCGGGGTGCA
GGAGCGCATCGACACCGTCAACCGGGTGCTGCGCGAGCAGATCGCCGGTATCCGCGTCATCCGCGCCTTCGTCCGCGACA
CGCACGAGCGCGAGCGGTTCGCCGGGGCCAACACCGACCTGTACGACGTGTCGATGCGGGCCGGCCGGCTGATGTCGATG
ATGTTCCCGCTGGTCATGCTGATCATGAACCTCTCCAGCGTGGCCGTCGTCTGGTTCGGCGGGCTGCGCATCGACGGCGG
CGACATGCAGATCGGCGCGATGACCGCGTTCCTCAGCTACCTGATGTACATCCTGATGTCGATCATGATGGCGACGTTCA
TGGTGATGATGCTGCCGCGCGCCGAGGTCTGCGCCGAGCGCATCCAGGAGGTGCTGGCCACCGACTCCAGCGTCGTACCG
CCCGCGCACCCCGTCACCGAGCTGCGCCGGCACGGCGAACTGGAGCTGCGCGACGTCGAGTTCCGCTTCCCGGGCGCCGA
GCAGCCGGTCCTCAAGGACATCTCGCTGACCGCCCGCCCCGGTGAGACCACCGCCGTCATCGGCTCGACCGGCAGCGGCA
AGTCCACCCTCCTCGGGCTCGTCCCCCGCCTCTTCGACGCCACCGGCGGCACGGTCCTGGTGGACGGCGTGGACGTGCGC
ACCCTCGACCCGGAGACCCTGGCCAGGACCATCGGCCTGGTCCCGCAGAAGCCGTACCTCTTCTCCGGGACGGTCGCCGG
CAACCTGCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCCCTGGAGACCGCCCAGGCGCGGGACTTCG
TCGAGCGGATGGACGGCGGCCTGGACGCCCCCGTCGCCCAGGGCGGCTCCAACGTCTCCGGCGGCCAGCGCCAGCGGCTG
GCCATCGCCCGCGCCCTGGTGCGCCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCCCTGGACTACGCGACGGA
CGCCGCGCTGCGGGCGGCGCTCTCCCACGAGACCGACCGGGCGACGGTGGTGATCGTCGCCCAGCGGGTCTCCACGATCC
GCGGCGCCGACCGGATCGTCGTCCTCGACGAGGGCCGCGTCGTGGGCACCGGCACCCACACCGAGCTGATGGCCGACAAC
GAGACCTACCGGGAGATCGTGCTCTCCCAGCTCACCGAGCAGGAGGCGGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(19-287)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.817

94.454

0.376