Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   WAB15_RS23725 Genome accession   NZ_CP147982
Coordinates   5243757..5244881 (-) Length   374 a.a.
NCBI ID   WP_384428138.1    Uniprot ID   A0ABZ2QQB9
Organism   Streptomyces sp. BP-8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5238757..5249881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WAB15_RS23700 (WAB15_23675) - 5239011..5239751 (+) 741 WP_407287470.1 hypothetical protein -
  WAB15_RS23705 (WAB15_23680) - 5239835..5240419 (-) 585 WP_407287471.1 phosphatase PAP2 family protein -
  WAB15_RS23710 (WAB15_23685) - 5240684..5241505 (+) 822 WP_407287472.1 hypothetical protein -
  WAB15_RS23715 (WAB15_23690) - 5241765..5242748 (+) 984 WP_399150907.1 NAD-dependent epimerase/dehydratase family protein -
  WAB15_RS23720 (WAB15_23695) - 5243112..5243669 (+) 558 WP_407287473.1 DUF3291 domain-containing protein -
  WAB15_RS23725 (WAB15_23700) disA 5243757..5244881 (-) 1125 WP_384428138.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  WAB15_RS23730 (WAB15_23705) radA/sms 5245008..5246420 (-) 1413 WP_407287474.1 DNA repair protein RadA Machinery gene
  WAB15_RS23735 (WAB15_23710) - 5246672..5248492 (+) 1821 WP_407287475.1 BACON domain-containing protein -
  WAB15_RS23740 (WAB15_23715) - 5248675..5249550 (-) 876 WP_399150911.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.22 Da        Isoelectric Point: 4.9306

>NTDB_id=863408 WAB15_RS23725 WP_384428138.1 5243757..5244881(-) (disA) [Streptomyces sp. BP-8]
MAANDRASTPGRSGGNPGTESLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVETMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALSELDSLTHTELLELPIVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGT
VIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=863408 WAB15_RS23725 WP_384428138.1 5243757..5244881(-) (disA) [Streptomyces sp. BP-8]
GTGGCAGCCAACGACCGGGCATCGACTCCCGGCAGGTCCGGTGGGAACCCCGGCACCGAGAGCCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGTACCGCACTGCGCGACGGCCTGGAGCGGATCCTCCGCGGCAATACCGGCGGGCTGATCGTCC
TCGGCTTCGACAAGACCGTCGAGACCATGTGCACCGGCGGCTTCGTCCTCGACGTCGAGTTCACCGCCACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCCCTGGTCCTCGACAAGGACATCACCAAGATCCTGCGCGCCGGCGTCCAGCTGGTCCC
CGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCCCAGCGCGTCTCGATCCAGGCGGGTTTCCCCG
TCGTCTCGGTCAGCCAGTCGATGCGCCTGATCGCCCTGTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCCGGCACCCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTCGAGCTCGGCACGGACGGCCGCCTCCTCACCCTCCAGCTCGAAGAGCTGATCGCC
GGCGTGGAGCCCGAGCGAGAGCTGGTCGTCCGCGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGCCGA
AGCGCTCTCCGAGCTCGACTCCCTCACCCACACCGAGCTGCTCGAACTCCCCATCGTGGCCCGCGCGCTGGGCTACAGCG
GCGCCCCGGAGACCCTGGACTCCGCCGTCTCCCCGCGCGGCTTCCGCCTGCTGGCGAAGGTCCCCCGTCTGCCCGGCACG
GTCATCGACCGCCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTGCTCGCGGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCCCGCGCCCGCTCGGTACGCGAGGGCCTGTCCCGCCTGGCGGAGTCGTCGATCTTGGAGAGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.376

92.513

0.42