Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   Q7642_RS09650 Genome accession   NZ_CP131652
Coordinates   1988289..1989332 (-) Length   347 a.a.
NCBI ID   WP_001017129.1    Uniprot ID   A0A0U1MRG1
Organism   Staphylococcus aureus strain 2008S01-206     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1983289..1994332
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7642_RS09620 (Q7642_09610) - 1983710..1984966 (-) 1257 WP_001793428.1 aminopeptidase -
  Q7642_RS09625 (Q7642_09615) - 1984969..1985169 (-) 201 WP_001813025.1 DUF1128 family protein -
  Q7642_RS09630 (Q7642_09620) - 1985316..1985780 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  Q7642_RS09635 (Q7642_09625) - 1985787..1986062 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  Q7642_RS09640 (Q7642_09630) - 1986340..1987557 (+) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  Q7642_RS09645 (Q7642_09635) vraR 1987670..1988299 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  Q7642_RS09650 (Q7642_09640) vraS 1988289..1989332 (-) 1044 WP_001017129.1 sensor histidine kinase Regulator
  Q7642_RS09655 (Q7642_09645) liaF 1989329..1990030 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  Q7642_RS09660 (Q7642_09650) - 1990045..1990431 (-) 387 WP_001110183.1 hypothetical protein -
  Q7642_RS09665 (Q7642_09655) map 1990648..1991406 (-) 759 WP_000636137.1 type I methionyl aminopeptidase -
  Q7642_RS09670 (Q7642_09660) - 1992049..1993035 (+) 987 WP_000999711.1 aromatic acid exporter family protein -
  Q7642_RS09675 (Q7642_09665) - 1993211..1993627 (-) 417 WP_025174454.1 hypothetical protein -
  Q7642_RS09680 (Q7642_09670) - 1993656..1993765 (-) 110 Protein_1866 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40060.56 Da        Isoelectric Point: 6.0577

>NTDB_id=863322 Q7642_RS09650 WP_001017129.1 1988289..1989332(-) (vraS) [Staphylococcus aureus strain 2008S01-206]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQILILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=863322 Q7642_RS09650 WP_001017129.1 1988289..1989332(-) (vraS) [Staphylococcus aureus strain 2008S01-206]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCT
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCGAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U1MRG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997