Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   WFE12_RS05615 Genome accession   NZ_CP147877
Coordinates   1078852..1079595 (+) Length   247 a.a.
NCBI ID   WP_003233230.1    Uniprot ID   G4NRP4
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1073852..1084595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WFE12_RS05580 yhaI 1074181..1074522 (+) 342 WP_009966921.1 YhaI family protein -
  WFE12_RS05585 scoC 1074519..1075130 (-) 612 WP_032723470.1 HTH-type transcriptional regulator Hpr -
  WFE12_RS05590 yhaH 1075307..1075663 (-) 357 WP_003245875.1 YtxH domain-containing protein -
  WFE12_RS05595 - 1075793..1075984 (+) 192 WP_003233238.1 hypothetical protein -
  WFE12_RS05600 trpP 1076058..1076576 (-) 519 WP_003233236.1 tryptophan transporter TrpP -
  WFE12_RS05605 serC 1076701..1077780 (-) 1080 WP_003233234.1 3-phosphoserine/phosphohydroxythreonine transaminase -
  WFE12_RS05610 hinT 1077927..1078364 (-) 438 WP_003233231.1 HIT family protein -
  WFE12_RS05615 pptA 1078852..1079595 (+) 744 WP_003233230.1 ABC transporter ATP-binding protein EcsA Regulator
  WFE12_RS05620 ecsB 1079588..1080814 (+) 1227 WP_003245169.1 ABC transporter permease EcsB -
  WFE12_RS05625 ecsC 1080834..1081544 (+) 711 WP_003233225.1 EcsC family protein -
  WFE12_RS05630 sndC 1081562..1082752 (-) 1191 WP_003245681.1 N-acetyl amino acid acetylase SndC -
  WFE12_RS05635 - 1082825..1084216 (-) 1392 WP_003233218.1 hypothetical protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=863252 WFE12_RS05615 WP_003233230.1 1078852..1079595(+) (pptA) [Bacillus subtilis subsp. subtilis str. 168]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=863252 WFE12_RS05615 WP_003233230.1 1078852..1079595(+) (pptA) [Bacillus subtilis subsp. subtilis str. 168]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NRP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547