Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   UXR38_RS00120 Genome accession   NZ_CP147872
Coordinates   29960..30760 (+) Length   266 a.a.
NCBI ID   WP_336469759.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN131     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24960..35760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR38_RS00105 (UXR38_00105) walK 25629..27455 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  UXR38_RS00110 (UXR38_00110) yycH 27448..28782 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  UXR38_RS00115 (UXR38_00115) - 28783..29571 (+) 789 WP_001104165.1 two-component system regulatory protein YycI -
  UXR38_RS00120 (UXR38_00120) vicX 29960..30760 (+) 801 WP_336469759.1 MBL fold metallo-hydrolase Regulator
  UXR38_RS00125 (UXR38_00125) adsA 30987..33305 (+) 2319 WP_000645787.1 LPXTG-anchored adenosine synthase AdsA -
  UXR38_RS00130 (UXR38_00130) rlmH 33673..34152 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  UXR38_RS00135 (UXR38_00135) - 34474..35730 (+) 1257 WP_000566670.1 MrcB family domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30335.57 Da        Isoelectric Point: 6.5730

>NTDB_id=863128 UXR38_RS00120 WP_336469759.1 29960..30760(+) (vicX) [Staphylococcus aureus strain BSN131]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFHVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=863128 UXR38_RS00120 WP_336469759.1 29960..30760(+) (vicX) [Staphylococcus aureus strain BSN131]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCCATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47