Detailed information NTG0086309

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KI216_RS09965
• Genome accession: NZ_AP024595
• Coordinates: 2095153..2095875 (-)
• Length: 240 a.a.
• NCBI ID: WP_005009020.1
• Uniprot ID: N9CBG7
• Organism: Acinetobacter bouvetii strain JCM 18991
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2090153..2100875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI216_RS09935 (ACBO_19310)	-	2090562..2090993 (-)	432	WP_005009034.1	SRPBCC family protein	-
KI216_RS09940 (ACBO_19320)	tadA	2091049..2091573 (-)	525	WP_005009031.1	tRNA adenosine(34) deaminase TadA	-
KI216_RS09945 (ACBO_19330)	-	2091581..2092705 (-)	1125	WP_005009029.1	enoyl-CoA hydratase/isomerase family protein	-
KI216_RS09950 (ACBO_19340)	ung	2092702..2093415 (-)	714	WP_005009026.1	uracil-DNA glycosylase	-
KI216_RS09955 (ACBO_19350)	-	2093461..2094057 (-)	597	WP_005009024.1	6-pyruvoyl trahydropterin synthase family protein	-
KI216_RS09960 (ACBO_19360)	gspK	2094179..2095156 (-)	978	WP_005009022.1	type II secretion system minor pseudopilin GspK	-
KI216_RS09965 (ACBO_19370)	xcpW	2095153..2095875 (-)	723	WP_005009020.1	type II secretion system protein GspJ	Machinery gene
KI216_RS09970 (ACBO_19380)	xcpV	2095875..2096315 (-)	441	WP_005009019.1	type II secretion system minor pseudopilin GspI	Machinery gene
KI216_RS09975 (ACBO_19390)	-	2096305..2096853 (-)	549	WP_005009018.1	pilus assembly FimT family protein	-
KI216_RS09980 (ACBO_19400)	-	2096863..2097477 (-)	615	WP_005009016.1	TetR/AcrR family transcriptional regulator	-
KI216_RS09985 (ACBO_19410)	-	2097522..2098295 (-)	774	WP_005009014.1	TatD family hydrolase	-
KI216_RS09990 (ACBO_19420)	-	2098327..2098668 (-)	342	WP_005009011.1	PilZ domain-containing protein	-
KI216_RS09995 (ACBO_19430)	-	2098686..2099669 (-)	984	WP_005009009.1	DNA polymerase III, delta' subunit	-
KI216_RS10000 (ACBO_19440)	kdsB	2099686..2100447 (-)	762	WP_005009008.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 240 a.a.
• Molecular weight: 26542.79 Da
• Isoelectric Point: 5.3084

>NTDB_id=86309 KI216_RS09965 WP_005009020.1 2095153..2095875(-) (xcpW) [Acinetobacter bouvetii strain JCM 18991]
MQPKNKINQTLSSGFTLVELLVAVAIFAVLSALGWKVFDYIAKVKERNTMHEVQLSQLQEAYQQILRDTVQAVPLTANIN
GNIQPALVLQNGRLSFSKTGVTDPLNQGIAPDERIEYAYRAEEKKLYRLKYSNLNQTGHDQPDSSVLLADAEQFEITVLN
PNELNNWPDPLANLSQASAQQHFPRGLKIKLKVNNVEYEWLFSLLNTDFLQKSSVGQESGNSGSAGDSSHAGDTQGVSAQ

Nucleotide

• Length: 723 bp

>NTDB_id=86309 KI216_RS09965 WP_005009020.1 2095153..2095875(-) (xcpW) [Acinetobacter bouvetii strain JCM 18991]
ATGCAGCCGAAAAATAAAATAAATCAAACCCTATCTTCAGGTTTTACATTGGTTGAGCTGCTGGTGGCGGTTGCGATTTT
TGCGGTGCTGTCTGCATTGGGCTGGAAAGTTTTTGACTATATTGCCAAAGTCAAAGAGCGCAATACAATGCATGAGGTGC
AGCTGTCGCAGCTGCAGGAAGCTTATCAGCAGATTTTGCGGGATACCGTACAGGCTGTGCCGCTAACGGCCAATATTAAT
GGCAATATTCAGCCAGCGCTGGTACTGCAAAATGGCCGTTTGAGTTTTAGTAAAACTGGGGTGACTGATCCTTTGAATCA
AGGTATTGCACCTGATGAACGCATTGAATATGCATACCGCGCAGAAGAAAAAAAACTCTATCGGCTCAAGTACAGCAATT
TAAATCAGACAGGGCATGATCAGCCAGATTCCAGTGTGCTTTTGGCAGATGCAGAGCAGTTTGAAATAACCGTGCTGAAC
CCGAATGAACTTAATAATTGGCCTGATCCATTGGCAAATTTGTCGCAAGCCAGCGCACAGCAGCATTTTCCGCGGGGCTT
AAAAATTAAGCTCAAGGTGAATAATGTGGAATATGAGTGGCTATTTAGCCTGCTGAATACGGATTTCCTTCAGAAAAGCA
GTGTGGGGCAGGAGAGTGGCAATAGTGGCAGCGCTGGCGATTCAAGTCATGCAGGCGATACTCAAGGAGTGTCTGCGCAA
TGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (67-201)

• Prokaryotic N-terminal methylation motif (N_methyl) (12-33)

3D structure

• AlphaFold DB: N9CBG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	55.869	88.75	0.496