Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   WDV80_RS08035 Genome accession   NZ_CP147733
Coordinates   1571841..1573175 (+) Length   444 a.a.
NCBI ID   WP_001089363.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SagR272_TC     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1566841..1578175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDV80_RS08020 (WDV80_08020) - 1567824..1570007 (+) 2184 WP_000795065.1 PTS transporter subunit IIBC -
  WDV80_RS08025 (WDV80_08025) - 1570061..1570876 (+) 816 WP_001029870.1 endonuclease/exonuclease/phosphatase family protein -
  WDV80_RS08030 (WDV80_08030) - 1571092..1571844 (+) 753 Protein_1504 response regulator transcription factor -
  WDV80_RS08035 (WDV80_08035) comD/blpH 1571841..1573175 (+) 1335 WP_001089363.1 GHKL domain-containing protein Regulator
  WDV80_RS08040 (WDV80_08040) - 1573264..1573428 (-) 165 Protein_1506 cysteine peptidase family C39 domain-containing protein -
  WDV80_RS08045 (WDV80_08045) - 1573717..1573890 (+) 174 WP_000683598.1 hypothetical protein -
  WDV80_RS08050 (WDV80_08050) - 1573959..1574806 (+) 848 Protein_1508 ABC transporter ATP-binding protein -
  WDV80_RS08055 (WDV80_08055) - 1574812..1575964 (+) 1153 Protein_1509 ABC transporter permease subunit -
  WDV80_RS08060 (WDV80_08060) - 1575959..1576141 (-) 183 WP_001866975.1 hypothetical protein -
  WDV80_RS08065 (WDV80_08065) - 1576193..1577227 (+) 1035 WP_000369171.1 acyltransferase family protein -
  WDV80_RS08070 (WDV80_08070) - 1577474..1577899 (+) 426 WP_000823120.1 PTS mannose transporter subunit IIA -

Sequence

Protein


Download         Length: 444 a.a.        Molecular weight: 51233.02 Da        Isoelectric Point: 8.5194

>NTDB_id=863020 WDV80_RS08035 WP_001089363.1 1571841..1573175(+) (comD/blpH) [Streptococcus agalactiae strain SagR272_TC]
MNSTLSILEIALTIILTIFLFSKISGRQLTLIEIGICIALRLGLVILFIAANTIINLSFLKYWLLPIYMLSLAFLLLRPI
SKTLVVFYGLFPIVLRNLCSRSLAFFVFPLFNIDFHTTNQGFWGYFVDVLSTLCVLLFLRWMQYDFKALRSSEVSPTDRR
ILQFTNGCMVSYYLLMQFLTYFEYELAINTVIYRQFLLVAYWIIFTGAIASLDRRLRNSLQERLAVQRELQLANMIDYSH
HIEGLYKEVRSFRHDYSNMLTTLKLGIDNEDISIVKSVYQSIFKESNTHFRHPKYNIDRLVNVDNPALKSLLAAKLSQAI
ANHIMVSIEVPDSIKPQGMELIDFITIVSVLWDNAIEASLETDDPKIAMSYFTLKHKQIFIIENSTKEKAIDTSTIFNYE
ISSKGRNRGIGLYNVRGVINRYPNISIATSSQDFSFCQTFEIIL

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=863020 WDV80_RS08035 WP_001089363.1 1571841..1573175(+) (comD/blpH) [Streptococcus agalactiae strain SagR272_TC]
ATGAATTCTACTCTATCCATCTTAGAGATAGCTTTAACGATAATATTAACAATATTTCTCTTTTCTAAAATCAGTGGACG
TCAATTAACTTTAATAGAGATTGGAATTTGTATTGCTCTGAGATTAGGACTTGTAATTTTATTTATAGCAGCTAATACTA
TTATTAATCTTTCATTTCTAAAGTACTGGCTTCTCCCCATCTATATGTTAAGTCTGGCTTTCTTGTTGCTAAGACCTATA
TCTAAAACTTTAGTAGTCTTTTATGGCTTGTTTCCAATTGTTCTCAGAAATCTTTGTTCACGTTCTTTAGCTTTTTTTGT
CTTTCCTTTGTTTAATATTGATTTTCATACAACCAACCAGGGGTTTTGGGGATATTTTGTTGATGTCTTGTCTACTCTTT
GTGTTCTCTTATTTTTAAGATGGATGCAATACGATTTTAAAGCATTGCGAAGTAGTGAAGTTTCGCCAACAGATAGGAGA
ATTCTCCAATTTACGAATGGGTGCATGGTGAGTTATTACTTATTGATGCAGTTTTTAACTTACTTCGAATATGAATTAGC
CATCAATACTGTTATTTACCGACAATTTTTGCTTGTTGCTTATTGGATTATATTTACGGGAGCAATAGCCAGTTTAGACC
GGAGACTTCGAAATTCTTTACAGGAGAGGTTAGCTGTTCAAAGAGAACTCCAATTGGCTAATATGATAGATTATAGCCAC
CATATTGAGGGATTGTATAAAGAAGTTAGGAGCTTCCGACATGATTATAGTAACATGTTAACGACCTTGAAACTAGGGAT
TGATAATGAAGATATATCTATTGTCAAATCAGTTTATCAGTCTATCTTTAAAGAATCTAATACACATTTCCGACATCCTA
AGTATAATATAGACCGGTTGGTTAATGTAGATAACCCAGCCTTAAAAAGTCTTTTAGCAGCCAAGCTTTCACAAGCGATA
GCCAATCATATTATGGTATCTATAGAAGTACCAGACAGTATTAAACCTCAAGGGATGGAACTGATTGATTTTATTACCAT
TGTATCTGTTTTATGGGATAACGCTATTGAGGCATCTTTAGAGACAGACGATCCTAAGATAGCCATGTCTTATTTTACAT
TAAAACATAAACAAATTTTTATCATAGAAAATTCAACTAAGGAAAAGGCAATAGATACGTCAACGATATTCAATTATGAG
ATAAGTAGTAAGGGGCGGAATAGAGGAATAGGTCTTTACAATGTCAGGGGAGTTATCAATCGTTATCCAAATATTTCTAT
TGCAACAAGTAGCCAAGATTTTAGTTTCTGCCAAACTTTCGAAATCATATTATAG

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(339-439)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

35.683

100

0.365