Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WDV80_RS04440 Genome accession   NZ_CP147733
Coordinates   928212..928988 (+) Length   258 a.a.
NCBI ID   WP_000704976.1    Uniprot ID   Q3K2X2
Organism   Streptococcus agalactiae strain SagR272_TC     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 923212..933988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDV80_RS04425 (WDV80_04425) - 925263..925691 (-) 429 WP_000267398.1 GNAT family N-acetyltransferase -
  WDV80_RS04430 (WDV80_04430) - 925725..926489 (-) 765 WP_000586353.1 nucleoside phosphorylase -
  WDV80_RS04435 (WDV80_04435) rlmD 926758..928113 (-) 1356 WP_001103616.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  WDV80_RS04440 (WDV80_04440) recX 928212..928988 (+) 777 WP_000704976.1 recombination regulator RecX Regulator
  WDV80_RS04445 (WDV80_04445) - 929072..929605 (+) 534 WP_001239184.1 DUF402 domain-containing protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30745.65 Da        Isoelectric Point: 9.7605

>NTDB_id=862972 WDV80_RS04440 WP_000704976.1 928212..928988(+) (recX) [Streptococcus agalactiae strain SagR272_TC]
MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKELIKYL
QQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQK
LYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKFSKKYDQYELKQRIINAL
MRKGYQYEDIKSALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=862972 WDV80_RS04440 WP_000704976.1 928212..928988(+) (recX) [Streptococcus agalactiae strain SagR272_TC]
ATGAAAATAACCAAAATCGAAAAGAAAAAAAGACTTTACACTCTAGAGCTAGACAATACCGAAAATTTATATATAACAGA
AGATACTATCGTTCATTTTATGTTAAGTAAAGGGATGATAGTTAATGCCGAGAAACTTGAAAATATTAAAAAATTTGCCC
AACTATCATATGGTAAAAATCTAGGTCTTTATTATATTTCTTTCAAGCAGAGAACCGAGAAAGAACTTATTAAATATCTT
CAACAACATGATATTGATTCTAAAATTATTCCACAAATTATTGATAATCTAAAAAGTGAGAATTGGATAAACGATAAAAA
CTACGTGCAATCTTTCATACAGCAAAATCTAAATACTGGCGATAAGGGGCCATACGTGATAAAACAAAAATTATTGCAAA
AAGGTATCAAAAGTAAAATAATTGAATCTGAACTTCAAGCTATAAATTTTCAAGACTTAGCATCCAAAATAAGCCAAAAA
CTCTATAAAAAATATCAAAACAAACTTCCACTAAAAGCATTAAAAGATAAATTGATGCAGAGCTTAACTACAAAAGGATT
TGATTATCAGATAGCGCATACCGTAATTCAAAACCTTGAAATTGAAAAAGATCAAGAACTTGAAGAAGACCTCATTTATA
AAGAATTAGATAAACAATACCAAAAATTCTCAAAAAAATATGACCAGTATGAATTAAAGCAACGTATAATCAATGCCTTA
ATGCGTAAAGGATACCAGTACGAAGATATCAAAAGTGCTTTAAGAGAATATTTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q3K2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

37.931

100

0.384