Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   KI216_RS01130 Genome accession   NZ_AP024595
Coordinates   253218..254783 (-) Length   521 a.a.
NCBI ID   WP_005013394.1    Uniprot ID   N9C741
Organism   Acinetobacter bouvetii strain JCM 18991     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 248218..259783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI216_RS01115 (ACBO_02100) gpmI 249026..250573 (+) 1548 WP_005013407.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  KI216_RS01120 (ACBO_02110) - 250601..251773 (+) 1173 WP_005013404.1 S41 family peptidase -
  KI216_RS01125 (ACBO_02120) pilR 251787..253199 (-) 1413 WP_005013400.1 sigma-54-dependent transcriptional regulator Regulator
  KI216_RS01130 (ACBO_02130) pilS 253218..254783 (-) 1566 WP_005013394.1 sensor histidine kinase Regulator
  KI216_RS01135 (ACBO_02140) - 254804..255439 (-) 636 WP_005013391.1 response regulator transcription factor GacA -
  KI216_RS01140 (ACBO_02150) - 255647..256702 (+) 1056 WP_026253402.1 serine hydrolase -
  KI216_RS01145 (ACBO_02160) thrC 256847..257986 (-) 1140 WP_005013380.1 threonine synthase -
  KI216_RS01150 (ACBO_02170) - 258053..259357 (-) 1305 WP_026253401.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59266.10 Da        Isoelectric Point: 7.6919

>NTDB_id=86290 KI216_RS01130 WP_005013394.1 253218..254783(-) (pilS) [Acinetobacter bouvetii strain JCM 18991]
MSQRPNLSELNQYHLGIWYSAYRFIISSCLLIIFLFTYNQLNNQYQYPKLYLYVLTIYVIVNSLQFFALNKIKTAIPKQM
ILIFFADVTALSLLTLALDGPNLHISLLFVITIFAASILLDARKALVITLIAVISVIYQLFLGSILDFASLRNIGNSALL
AFLFFVVYGCGQIAVRRFQILENLNFSQSIELHQLQNINRYILEQIETGYLVLDENCHVVLSNPAACHLLGISAAYSADK
YPLYMTQPDLFELLKFEDLKDGEKFQFESQQSLYHIHVHVKKLIVPHQLLTLLVLQDAQKLNQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANELQNGSGPAQQQMLSKMISKQAQRIDSIVQDTLNMVKNRETHAVQLCLNRFIPQLIQEDLADVQK
KIQLNIQKDCLISFDEAQLRQVLINLIRNAIRHNDADAPFIELNIYPHEKIIRLDVRDFGRGVAVQHRTSLFQPFFSTEI
TGTGLGLYLAHSFCEANQAQLAYVEQQRGACFRLICQRAAI

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=86290 KI216_RS01130 WP_005013394.1 253218..254783(-) (pilS) [Acinetobacter bouvetii strain JCM 18991]
ATGAGTCAGCGCCCCAATCTTTCAGAACTTAATCAATATCATCTGGGCATTTGGTACAGCGCTTACCGTTTTATTATCAG
CAGCTGCCTGCTGATTATTTTTTTATTTACCTATAACCAGCTCAATAATCAGTATCAGTATCCTAAGCTTTATCTCTATG
TGTTAACGATTTATGTCATCGTGAACAGCCTGCAATTTTTTGCACTGAATAAAATCAAAACCGCCATCCCGAAGCAGATG
ATCTTGATTTTTTTTGCCGATGTTACAGCATTAAGCCTGCTGACTTTGGCATTGGATGGCCCTAACCTGCATATCAGCCT
GCTGTTTGTCATCACCATTTTCGCCGCATCAATTCTGCTGGATGCGAGAAAAGCGCTGGTGATTACCCTGATTGCTGTGA
TCAGTGTGATTTATCAGCTCTTTTTAGGCTCTATTTTAGACTTTGCCTCACTGCGCAATATTGGCAACAGCGCCCTGCTG
GCCTTCTTATTCTTTGTGGTGTACGGATGCGGGCAAATTGCCGTGCGGCGCTTCCAGATTCTGGAAAATTTGAACTTTTC
ACAGTCGATCGAATTGCACCAGCTGCAAAATATCAACCGCTATATTTTGGAACAGATTGAAACCGGCTACCTGGTCTTGG
ACGAAAACTGCCATGTGGTGCTCAGCAACCCTGCCGCCTGCCATTTGCTTGGCATCTCTGCAGCCTACAGCGCAGATAAA
TATCCCCTGTATATGACTCAGCCTGATTTATTCGAATTGCTGAAATTTGAAGACCTCAAAGATGGCGAAAAGTTTCAGTT
TGAATCTCAGCAAAGCCTTTACCATATTCATGTCCATGTGAAGAAACTGATTGTGCCGCATCAGCTGCTGACGCTTTTGG
TGCTGCAGGATGCGCAAAAGCTGAACCAGCAGGTGCAGCAGCTGAAGCTGGCCGCTCTGGGCCAGCTGTCCGCCAGCATT
GCCCATGAAATCCGCAACCCTTTGGCGGCTATTGTCCAGGCTAATGAACTGCAAAACGGCAGCGGCCCTGCCCAGCAGCA
GATGCTCAGCAAAATGATCAGCAAGCAGGCGCAGCGCATTGACAGCATTGTGCAGGATACGCTGAATATGGTGAAAAACC
GTGAAACCCATGCTGTGCAGCTCTGCTTGAACCGCTTTATACCGCAGCTGATTCAGGAGGATTTAGCGGATGTGCAAAAG
AAAATTCAGCTGAATATACAAAAAGACTGCCTGATTTCTTTTGATGAAGCGCAATTGCGTCAAGTGCTGATTAACCTCAT
CAGAAATGCAATCCGCCACAATGACGCAGATGCGCCTTTTATTGAGCTCAATATTTATCCGCATGAGAAGATTATCAGGC
TGGATGTGCGGGATTTTGGCCGCGGCGTTGCTGTTCAGCACCGCACTTCGCTATTTCAGCCTTTTTTCAGTACCGAAATT
ACAGGAACTGGTTTAGGATTGTATCTTGCGCACAGCTTCTGTGAAGCCAATCAGGCTCAGCTGGCTTATGTAGAACAACA
ACGGGGCGCCTGCTTTAGGCTGATTTGCCAGCGTGCAGCGATTTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9C741

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

59.406

96.929

0.576

Multiple sequence alignment