Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   WDV79_RS03770 Genome accession   NZ_CP147731
Coordinates   754041..754523 (-) Length   160 a.a.
NCBI ID   WP_000163516.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain SagR266     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 749041..759523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WDV79_RS03750 (WDV79_03750) alsS 749300..750982 (-) 1683 WP_000140348.1 acetolactate synthase AlsS -
  WDV79_RS03755 (WDV79_03755) - 751092..752318 (-) 1227 WP_000934876.1 hypothetical protein -
  WDV79_RS03760 (WDV79_03760) - 752308..753498 (-) 1191 WP_001081539.1 AI-2E family transporter -
  WDV79_RS03765 (WDV79_03765) - 753590..754051 (-) 462 WP_000796045.1 NUDIX hydrolase -
  WDV79_RS03770 (WDV79_03770) mutX 754041..754523 (-) 483 WP_000163516.1 8-oxo-dGTP diphosphatase Machinery gene
  WDV79_RS03775 (WDV79_03775) hylB 754740..756002 (+) 1263 Protein_748 hyaluronate lyase -
  WDV79_RS03780 (WDV79_03780) - 756099..757232 (+) 1134 WP_000564797.1 ISAs1-like element IS1548 family transposase -
  WDV79_RS03785 (WDV79_03785) hylB 757317..759284 (+) 1968 Protein_750 hyaluronate lyase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18863.27 Da        Isoelectric Point: 4.4433

>NTDB_id=862856 WDV79_RS03770 WP_000163516.1 754041..754523(-) (mutX) [Streptococcus agalactiae strain SagR266]
MTKLATICYIDNGKELLLLYRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=862856 WDV79_RS03770 WP_000163516.1 754041..754523(-) (mutX) [Streptococcus agalactiae strain SagR266]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGTACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706