Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   Q5709_RS11990 Genome accession   NZ_CP131483
Coordinates   2532671..2537053 (-) Length   1460 a.a.
NCBI ID   WP_416393802.1    Uniprot ID   -
Organism   Acinetobacter radioresistens strain MC-14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2527671..2542053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q5709_RS11960 (Q5709_11965) elsL 2528676..2529185 (-) 510 WP_005018779.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  Q5709_RS11965 (Q5709_11970) - 2529189..2529596 (-) 408 WP_005018778.1 YbaN family protein -
  Q5709_RS11970 (Q5709_11975) - 2529702..2530571 (+) 870 WP_005018777.1 DUF1853 family protein -
  Q5709_RS11975 (Q5709_11980) - 2530709..2530849 (+) 141 WP_005018775.1 entericidin A/B family lipoprotein -
  Q5709_RS11980 (Q5709_11985) dapE 2530994..2532130 (+) 1137 WP_005018773.1 succinyl-diaminopimelate desuccinylase -
  Q5709_RS11985 (Q5709_11990) - 2532191..2532655 (-) 465 WP_005018772.1 hypothetical protein -
  Q5709_RS11990 (Q5709_11995) chpA 2532671..2537053 (-) 4383 WP_416393802.1 Hpt domain-containing protein Regulator
  Q5709_RS11995 (Q5709_12000) - 2537219..2539300 (-) 2082 WP_005018770.1 methyl-accepting chemotaxis protein -
  Q5709_RS12000 (Q5709_12005) - 2539346..2539882 (-) 537 WP_005018769.1 chemotaxis protein CheW -
  Q5709_RS12005 (Q5709_12010) - 2539887..2540255 (-) 369 WP_005018768.1 response regulator -
  Q5709_RS12010 (Q5709_12015) pilG 2540277..2540660 (-) 384 WP_005018759.1 twitching motility response regulator PilG Regulator
  Q5709_RS12015 (Q5709_12020) - 2540998..2541579 (+) 582 WP_005027625.1 hypothetical protein -

Sequence


Protein


Download         Length: 1460 a.a.        Molecular weight: 164861.61 Da        Isoelectric Point: 4.3956

>NTDB_id=862645 Q5709_RS11990 WP_416393802.1 2532671..2537053(-) (chpA) [Acinetobacter radioresistens strain MC-14]
MKQILKDLIGTTTLPEDSYLDQDAEILEIFVEELEEIFTDLDVLIQQWIQQPEQQDKLTSIRRYFHTLKGSGRMVGAKSS
GELAWTVEDLLNRIIAKTQAFTPAISRYVELVFKIYKYKLFYNFQNSQPHAIDLRPLVLIGQQLQQQGSLEPALEELLEL
SWTLCSPETVTGLELVEHTAETLPPLGVEKLEIHEEFDSLTAETLAIFLEESEEHLATIDEFLNNNEQGSNYNALIRALH
TLRGSSAMAQVEHIFEASSKVENLFKTMLQDELVSTSNETALLTHYAEFVRDYLYILKQECNIEQLEQVYQTFNHAWENY
GFHQEPVDDLVNPQGLVSRLLELEINQLLDAEFEFDQRVRTEYPEYLQLLVQQAQELVEHTRNRASQGVYDFTLELLQSY
QQLLAKPQLLNLDYAYELYTQAHQQLIYLFDTLAAGQRVSLSPAHQSLLEELSAFVQQEIQQVEELSTVTEPFKAPVDVA
VLEHTFNLGELSARIAADKALMHSEHSNQVADADLRDIFLEEAEELLAGMDSDLNSWTKESGQVTALNNLMRYLHTLKGG
ANMVQATHMGLIAHELESIYQRIINGQVQVSTVLMSIIRLVQDELAERIQILREQQIDYPAPATIEILKNIESISTGVLV
TTAEPKVAEEKLSESSQNIESDIADCTLADAEIAEHSEELQTDEQVRSIVEEVFLEEAEELLQTAHNLLDQWVEERSNRS
LLLQLQRNAHSLKGGARMAELEPVAVIAYALENTFEQFGLHNLTTSVYDPLLHTALRWLENAIFKEQYENFDSLKHSLDS
IQFTEIPAQLINQIPADNIVADSSLFEFVHGDGTEPPSMMGEWDNTERTENNEMIRISADLVEKMIDLAGENSINRSRVE
MDVGQVGSILSDMELAIQRLADQLRRMEGELESQIIAKHGTENSRYSDFDPLEMDQYSSLNQLSKSLAESASDLLDFKTT
LSEKIRDTEGLLLQQSRIQAEIQENLMRTRLVPFSRLLPRLQRIARQTSSALNRPAELVVQNTEGELDRNILERLVTPLE
HMLRNAIDHGIETIEQRLKQGKPESGRIELNINRQGTDVIITFTDDGQGINLEKLKNKALERGLIGAEQKLEAEELAQLI
FHPGLSTAVEITQISGRGVGLDVVQSSIKAMGGHVTVESVQGQGTTFTIRVPTTVAISDALMVKAGDQQYAVPLAQIERI
VRISPSMLEDYFAGKEDTFRIDNMYYKLRYLSEFVANQSLPRLTGIVHSLPVLLIKGSSGQTVALLVDQLVGSRAQIVVK
PVGQQLASVGAVAGATILGDGQVCLILDGQYIARQVQSSLRVKEVKESRELHRFNDERRLIMIVDDSVTVRKVTSRLLER
QGYDVVTAKDGVEAIEQLESIKPDLMLLDIEMPRMDGFEVTNLVRHHDVHRNMPIIMITSRTGEKHRERAFALGATQYMG
KPFQEADLLANIEALLEVMV

Nucleotide


Download         Length: 4383 bp        

>NTDB_id=862645 Q5709_RS11990 WP_416393802.1 2532671..2537053(-) (chpA) [Acinetobacter radioresistens strain MC-14]
ATGAAACAAATACTAAAAGACCTGATTGGAACAACGACTCTTCCTGAAGATAGCTATCTTGACCAAGATGCAGAGATTCT
TGAAATTTTTGTTGAAGAACTAGAAGAAATCTTTACTGATTTGGATGTTTTGATCCAGCAGTGGATACAGCAGCCTGAGC
AGCAGGACAAGCTGACCAGTATTCGCCGTTATTTTCATACCTTAAAAGGCTCCGGCCGGATGGTAGGAGCTAAAAGTTCC
GGTGAGTTAGCTTGGACGGTTGAAGATCTCTTGAATCGAATAATTGCTAAAACACAGGCTTTTACCCCGGCGATCAGTCG
TTATGTAGAATTAGTCTTTAAGATTTACAAATACAAGTTATTTTATAACTTTCAAAATAGTCAGCCTCATGCGATTGATT
TGCGTCCCCTCGTATTGATCGGGCAACAACTGCAACAGCAGGGCAGTCTTGAACCGGCACTTGAGGAATTACTGGAGCTT
AGCTGGACCTTATGTTCGCCTGAGACAGTCACCGGGCTTGAGCTGGTGGAACATACAGCAGAGACTCTACCACCACTAGG
TGTAGAGAAGCTTGAAATTCACGAGGAATTTGATTCATTAACTGCCGAGACACTGGCGATCTTTCTTGAAGAGTCGGAAG
AACATCTGGCAACTATTGATGAGTTCTTGAATAATAATGAACAGGGCAGTAATTATAATGCTCTGATCCGCGCTTTACAT
ACTTTGCGTGGCAGCTCGGCCATGGCTCAGGTAGAACACATATTTGAAGCAAGTAGTAAAGTTGAAAACCTGTTTAAAAC
CATGCTGCAAGATGAGCTGGTATCTACTTCAAATGAAACCGCTTTACTTACTCATTATGCTGAATTTGTAAGGGATTATC
TCTACATTCTAAAACAGGAATGTAATATAGAACAGTTGGAACAGGTTTATCAGACTTTTAATCATGCTTGGGAAAACTAC
GGATTCCATCAAGAACCTGTGGATGATCTCGTGAACCCCCAAGGTCTGGTTTCACGGCTCCTCGAGCTTGAAATCAACCA
GTTACTAGATGCCGAGTTCGAGTTTGATCAGCGGGTCCGTACCGAATATCCAGAATATTTACAGCTTTTGGTACAGCAGG
CACAGGAACTGGTTGAACATACACGAAACCGTGCCTCTCAAGGCGTATATGATTTTACGTTAGAACTACTTCAGAGCTAT
CAGCAGCTCTTGGCAAAACCGCAGCTATTAAATCTTGATTATGCATATGAACTGTATACTCAAGCTCATCAGCAGCTGAT
TTATCTGTTTGATACGCTTGCAGCGGGACAGCGTGTCAGCCTGAGCCCGGCTCATCAAAGTCTGCTTGAAGAATTATCTG
CATTTGTACAGCAAGAAATACAACAGGTAGAAGAGTTGTCCACTGTTACTGAGCCTTTTAAAGCTCCGGTTGACGTAGCA
GTTTTGGAACATACTTTCAACCTGGGAGAGCTTTCAGCACGTATAGCGGCTGATAAAGCGCTGATGCATTCTGAACATAG
TAATCAGGTTGCTGATGCTGATCTGCGCGATATCTTCTTGGAAGAGGCCGAAGAATTACTGGCTGGTATGGATAGTGACC
TGAACAGTTGGACAAAAGAATCAGGCCAAGTTACTGCTCTGAACAATCTAATGCGTTATTTGCATACCTTAAAAGGTGGT
GCAAACATGGTGCAGGCCACCCATATGGGATTAATTGCACATGAGCTGGAAAGCATTTATCAGAGAATTATTAACGGGCA
GGTTCAGGTCTCTACTGTACTGATGAGTATTATCCGGCTGGTACAGGATGAGCTGGCAGAACGCATCCAGATACTACGTG
AACAGCAGATTGACTACCCGGCGCCAGCAACTATTGAAATCCTCAAAAATATTGAGTCGATCAGCACTGGTGTATTAGTG
ACTACGGCTGAGCCAAAAGTAGCAGAAGAGAAGCTGTCCGAGTCGAGCCAAAATATTGAATCAGATATAGCTGATTGTAC
ACTTGCGGATGCGGAAATCGCTGAGCATTCCGAAGAGTTACAAACAGATGAACAGGTAAGATCAATTGTTGAAGAAGTTT
TTCTCGAGGAAGCCGAAGAGCTGTTACAGACCGCTCATAACTTGTTAGATCAATGGGTAGAAGAGCGCAGTAACCGGAGT
CTATTGCTACAGCTGCAACGGAATGCTCATAGTCTTAAGGGCGGCGCACGGATGGCCGAGCTTGAGCCGGTAGCCGTGAT
TGCTTATGCGCTGGAAAATACTTTTGAACAATTTGGTCTGCACAATCTTACCACCAGTGTTTATGACCCGCTTTTACATA
CTGCTTTACGCTGGTTGGAAAATGCTATCTTCAAAGAGCAGTATGAAAACTTTGACAGTTTGAAGCACAGCTTGGACTCA
ATCCAGTTTACTGAAATTCCTGCTCAGCTCATTAATCAGATTCCTGCAGATAATATCGTAGCTGATAGCAGTCTGTTTGA
ATTCGTGCATGGTGATGGTACTGAACCACCTTCCATGATGGGTGAATGGGACAATACAGAGCGGACTGAAAATAATGAAA
TGATCCGGATTTCAGCCGATCTGGTTGAGAAAATGATTGACCTTGCAGGTGAAAATTCCATCAACCGTTCCCGTGTTGAA
ATGGATGTGGGACAGGTCGGCTCTATTCTTTCCGACATGGAACTGGCTATTCAACGACTGGCTGACCAGTTACGCCGTAT
GGAGGGTGAGCTTGAGAGTCAGATTATTGCCAAGCATGGTACTGAGAATTCACGTTACAGCGATTTTGATCCTTTAGAAA
TGGATCAGTATTCTTCGCTAAATCAGTTATCCAAATCACTGGCTGAGTCAGCATCTGACTTACTTGACTTTAAAACCACA
TTATCTGAAAAAATACGTGATACTGAAGGTCTGCTATTACAGCAGTCAAGGATTCAGGCAGAGATTCAGGAAAACCTGAT
GCGGACCCGTCTGGTACCCTTTTCTCGATTATTACCGCGTTTACAGCGCATAGCACGGCAGACCTCTTCAGCACTAAACC
GTCCTGCAGAACTCGTTGTTCAAAACACTGAAGGAGAGCTGGACCGCAATATTTTAGAGCGACTGGTCACCCCGCTTGAA
CATATGCTGCGAAATGCAATTGATCATGGTATTGAAACCATTGAGCAGCGTCTCAAGCAAGGGAAACCTGAAAGTGGCCG
TATTGAGCTGAATATTAATCGCCAAGGTACAGATGTCATCATTACTTTTACAGATGATGGCCAAGGTATTAATCTTGAAA
AGCTGAAAAATAAAGCACTAGAGCGAGGTCTGATTGGAGCGGAACAAAAACTGGAAGCTGAAGAGCTGGCCCAGTTGATC
TTTCATCCAGGTTTAAGCACTGCAGTAGAAATTACCCAGATTTCTGGTCGTGGTGTAGGGCTGGATGTGGTACAGAGCAG
TATCAAGGCGATGGGTGGTCATGTGACGGTCGAGTCTGTACAGGGGCAGGGTACAACATTTACGATTCGTGTACCAACTA
CAGTAGCAATCAGTGATGCCCTGATGGTTAAAGCAGGTGACCAGCAATACGCTGTACCATTGGCGCAGATTGAACGTATT
GTGCGTATCTCTCCTTCTATGCTGGAAGACTATTTTGCTGGCAAAGAAGATACTTTCCGTATCGACAATATGTATTATAA
GCTACGTTATCTTTCAGAGTTTGTAGCAAATCAGTCTCTGCCTCGTCTTACCGGTATAGTCCACTCTCTGCCGGTACTGC
TGATTAAAGGGAGTAGTGGCCAGACAGTAGCGTTACTGGTTGACCAGTTGGTCGGATCTCGTGCACAAATTGTGGTAAAA
CCAGTGGGTCAACAGCTGGCCAGCGTAGGTGCAGTAGCTGGTGCAACAATTTTAGGTGATGGACAGGTTTGTCTCATTCT
GGATGGGCAGTATATTGCTCGTCAGGTTCAGTCTTCATTACGTGTCAAGGAAGTAAAAGAGTCTCGTGAGTTGCATCGCT
TTAATGATGAACGACGTCTGATTATGATCGTTGATGACTCAGTCACTGTACGCAAAGTCACCAGCCGATTGCTTGAGCGT
CAAGGTTATGATGTAGTGACCGCTAAAGATGGTGTTGAAGCGATTGAACAGCTGGAAAGTATTAAGCCTGATTTAATGCT
GCTCGATATTGAAATGCCGCGTATGGATGGTTTTGAAGTAACTAATCTGGTACGTCATCATGATGTACATCGTAATATGC
CAATTATTATGATTACTTCACGTACAGGTGAGAAACATCGTGAGCGCGCTTTTGCACTCGGAGCAACGCAATATATGGGC
AAACCTTTCCAGGAAGCAGACCTGTTGGCCAATATTGAAGCGTTACTTGAGGTTATGGTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

62.035

100

0.639