Detailed information NTG0862638

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q5709_RS06145
• Genome accession: NZ_CP131483
• Coordinates: 1308009..1308644 (+)
• Length: 211 a.a.
• NCBI ID: WP_005014695.1
• Uniprot ID: -
• Organism: Acinetobacter radioresistens strain MC-14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1303009..1313644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q5709_RS06110 (Q5709_06115)	kdsB	1303471..1304232 (+)	762	WP_005014710.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Q5709_RS06115 (Q5709_06120)	-	1304250..1305233 (+)	984	WP_005014708.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
Q5709_RS06120 (Q5709_06125)	-	1305252..1305593 (+)	342	WP_005014707.1	PilZ domain-containing protein	-
Q5709_RS06125 (Q5709_06130)	-	1305637..1306410 (+)	774	WP_248134270.1	TatD family hydrolase	-
Q5709_RS06130 (Q5709_06135)	-	1306450..1307058 (+)	609	WP_101162145.1	TetR/AcrR family transcriptional regulator	-
Q5709_RS06135 (Q5709_06140)	-	1307073..1307636 (+)	564	WP_416394324.1	type II secretion system protein	-
Q5709_RS06140 (Q5709_06145)	xcpV	1307626..1308012 (+)	387	WP_005014697.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q5709_RS06145 (Q5709_06150)	xcpW	1308009..1308644 (+)	636	WP_005014695.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q5709_RS06150 (Q5709_06155)	gspK	1308667..1309611 (+)	945	WP_005014694.1	type II secretion system minor pseudopilin GspK	-
Q5709_RS06155 (Q5709_06160)	-	1309708..1310304 (+)	597	WP_005014693.1	6-pyruvoyl trahydropterin synthase family protein	-
Q5709_RS06160 (Q5709_06165)	ung	1310349..1311062 (+)	714	WP_005014692.1	uracil-DNA glycosylase	-
Q5709_RS06165 (Q5709_06170)	-	1311059..1312183 (+)	1125	WP_005014691.1	enoyl-CoA hydratase/isomerase family protein	-
Q5709_RS06170 (Q5709_06175)	tadA	1312187..1312678 (+)	492	WP_005014690.1	tRNA adenosine(34) deaminase TadA	-
Q5709_RS06175 (Q5709_06180)	-	1312761..1313195 (+)	435	WP_005014689.1	SRPBCC family protein	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 24017.41 Da
• Isoelectric Point: 7.1980

>NTDB_id=862638 Q5709_RS06145 WP_005014695.1 1308009..1308644(+) (xcpW) [Acinetobacter radioresistens strain MC-14]
MKYKRGFTLVELLVAIAIFAALSALGWKVFDYLIKVKERNSIHEQNLARLQEAYQQILRDSLQLIPLTANNGGELRPALE
LNDQHFIFSKAGVTDPLGQGLGPYERIEYQYSSADQKLYRLKYQNLNTSTAIQPQSSVLLDQVEQYRISVLNPAELNRWP
EGVLNPASQSEQLKILPRGFKINLTINGTEYEWIYSLSNTGDLKEKTINLS

Nucleotide

• Length: 636 bp

>NTDB_id=862638 Q5709_RS06145 WP_005014695.1 1308009..1308644(+) (xcpW) [Acinetobacter radioresistens strain MC-14]
ATGAAATATAAACGGGGTTTTACTCTGGTGGAGCTGTTGGTCGCGATTGCGATTTTTGCAGCACTCTCTGCGCTGGGTTG
GAAGGTCTTTGATTATCTGATCAAAGTAAAAGAACGAAATAGTATACATGAGCAAAATCTTGCCCGGTTACAGGAAGCTT
ATCAGCAAATCTTACGTGACAGCCTGCAGCTGATTCCATTAACTGCAAATAATGGAGGAGAGTTGCGTCCTGCACTTGAA
TTAAACGATCAGCATTTTATTTTTAGTAAAGCTGGTGTAACTGATCCTTTGGGCCAGGGGCTGGGGCCTTATGAGCGGAT
CGAATATCAATACAGTAGTGCAGACCAGAAACTGTACCGGTTAAAATATCAAAACCTGAATACTTCAACTGCTATTCAGC
CCCAGTCAAGTGTGCTTCTTGATCAGGTCGAGCAATACCGGATTAGCGTCTTAAATCCGGCTGAACTAAACAGATGGCCT
GAAGGCGTATTGAATCCTGCTTCCCAATCAGAACAGCTTAAAATTCTACCGCGCGGTTTTAAAATCAATCTGACCATAAA
TGGAACTGAATACGAATGGATTTACAGCCTTTCAAATACAGGTGATTTAAAAGAAAAAACAATAAATCTATCTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	65.657	93.839	0.616