Detailed information NTG0862556

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Q4617_RS07825
• Genome accession: NZ_CP131470
• Coordinates: 1560941..1561669 (+)
• Length: 242 a.a.
• NCBI ID: WP_227540303.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain SC22
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1555941..1566669

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4617_RS07790 (Q4617_07790)	kdsB	1556132..1556893 (+)	762	WP_004911526.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Q4617_RS07795 (Q4617_07795)	-	1556895..1557884 (+)	990	WP_112986427.1	DNA polymerase III subunit delta'	-
Q4617_RS07800 (Q4617_07800)	-	1558109..1558453 (+)	345	WP_004911520.1	PilZ domain-containing protein	-
Q4617_RS07805 (Q4617_07805)	-	1558476..1559249 (+)	774	WP_112986426.1	TatD family hydrolase	-
Q4617_RS07810 (Q4617_07810)	-	1559288..1559896 (+)	609	WP_168153910.1	TetR/AcrR family transcriptional regulator	-
Q4617_RS07815 (Q4617_07815)	-	1559909..1560457 (+)	549	WP_112986424.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
Q4617_RS07820 (Q4617_07820)	xcpV	1560471..1560944 (+)	474	WP_227540305.1	type II secretion system minor pseudopilin GspI	Machinery gene
Q4617_RS07825 (Q4617_07825)	xcpW	1560941..1561669 (+)	729	WP_227540303.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Q4617_RS07830 (Q4617_07830)	gspK	1561666..1562625 (+)	960	WP_112986422.1	type II secretion system minor pseudopilin GspK	-
Q4617_RS07835 (Q4617_07835)	-	1562732..1563328 (+)	597	WP_004954093.1	6-carboxytetrahydropterin synthase	-
Q4617_RS07840 (Q4617_07840)	ung	1563367..1564080 (+)	714	WP_004911491.1	uracil-DNA glycosylase	-
Q4617_RS07845 (Q4617_07845)	-	1564077..1565201 (+)	1125	WP_171293853.1	enoyl-CoA hydratase/isomerase family protein	-
Q4617_RS07850 (Q4617_07850)	tadA	1565208..1565711 (+)	504	WP_087539688.1	tRNA adenosine(34) deaminase TadA	-
Q4617_RS07855 (Q4617_07855)	-	1565778..1566218 (+)	441	WP_075696895.1	SRPBCC family protein	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 27844.09 Da
• Isoelectric Point: 8.8298

>NTDB_id=862556 Q4617_RS07825 WP_227540303.1 1560941..1561669(+) (xcpW) [Acinetobacter junii strain SC22]
MKIKNVVMRLGCRFNVVSECQQSSTKSYLPNKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAGVSDPLKQGLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNQET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=862556 Q4617_RS07825 WP_227540303.1 1560941..1561669(+) (xcpW) [Acinetobacter junii strain SC22]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTGCAGATTTAATGTTGTCTCAGAGTGTCAGCAAAGTTCAACTAAGTC
TTATTTACCAAATAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATTTTTGCAGTGC
TTTCAATGTTAGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGGTCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCAGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	61.506	98.76	0.607