Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KI226_RS14020 Genome accession   NZ_AP024590
Coordinates   2881921..2882550 (-) Length   209 a.a.
NCBI ID   WP_088219728.1    Uniprot ID   A0AA86M8S2
Organism   Enterobacter kobei strain JCM 8580     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2876921..2887550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KI226_RS14005 (ENKO_27640) helD 2877168..2879222 (-) 2055 WP_088219725.1 DNA helicase IV -
  KI226_RS14010 (ENKO_27650) - 2879345..2879791 (+) 447 WP_088219726.1 YccF domain-containing protein -
  KI226_RS14015 (ENKO_27660) yccS 2879810..2881936 (+) 2127 WP_088219727.1 YccS family putative transporter -
  KI226_RS14020 (ENKO_27670) sxy/tfoX 2881921..2882550 (-) 630 WP_088219728.1 TfoX/Sxy family DNA transformation protein Regulator
  KI226_RS14025 (ENKO_27680) sulA 2882769..2883278 (+) 510 WP_088219729.1 SOS-induced cell division inhibitor SulA -
  KI226_RS14030 (ENKO_27690) ompA 2883633..2884691 (+) 1059 WP_088220384.1 porin OmpA -
  KI226_RS14035 (ENKO_27700) matP 2884770..2885222 (-) 453 WP_088219730.1 macrodomain Ter protein MatP -
  KI226_RS14040 (ENKO_27710) - 2885408..2887168 (+) 1761 WP_088219731.1 Lon protease family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24096.99 Da        Isoelectric Point: 9.6661

>NTDB_id=86252 KI226_RS14020 WP_088219728.1 2881921..2882550(-) (sxy/tfoX) [Enterobacter kobei strain JCM 8580]
MKDMSYRRIYESREYLAALGTIRHRALFGGYSLSVDDTVFAMVAKGDLYLRACEQSAEYRAQHSAPLLTIMKRGRPVLLN
YYRVDESLWQDRETLMKLSTWSLAAAWKEKMQRLCEPRLKDLPNLNFQLEMLLWEAGIPDAATLKKLGAKACWLRLRTLN
THLGINILLALAGAIEGKHQAALPAQLRQTLTTWYTEFEAERHQPQRIT

Nucleotide


Download         Length: 630 bp        

>NTDB_id=86252 KI226_RS14020 WP_088219728.1 2881921..2882550(-) (sxy/tfoX) [Enterobacter kobei strain JCM 8580]
ATGAAAGATATGTCTTATCGACGGATCTATGAATCACGTGAATATCTCGCCGCCCTGGGGACAATTCGCCATCGCGCGCT
GTTCGGCGGCTACAGCCTCTCCGTTGATGATACGGTGTTTGCCATGGTCGCAAAGGGCGATCTTTACCTGCGAGCCTGTG
AACAAAGTGCAGAATATCGGGCGCAACATTCAGCACCTCTGCTGACCATCATGAAACGCGGAAGGCCAGTATTATTGAAC
TATTACCGTGTTGATGAGAGCCTGTGGCAGGACCGCGAAACGCTGATGAAACTTTCAACATGGTCACTGGCTGCCGCGTG
GAAAGAAAAGATGCAGCGCCTGTGTGAGCCCAGGCTAAAAGATCTGCCGAATCTGAACTTTCAACTGGAGATGCTGTTAT
GGGAAGCAGGAATACCCGATGCCGCGACGTTAAAAAAGCTGGGAGCCAAAGCGTGCTGGCTGCGCTTACGAACGCTCAAC
ACGCATCTGGGTATCAATATTCTGCTGGCGCTGGCGGGAGCCATAGAGGGTAAGCACCAGGCGGCACTCCCGGCGCAACT
GCGCCAGACGCTAACGACCTGGTACACCGAATTTGAGGCTGAACGTCATCAGCCTCAGCGGATAACCTGA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.073

98.086

0.56

Multiple sequence alignment