Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | Q7260_RS05575 | Genome accession | NZ_CP131440 |
| Coordinates | 1046804..1047106 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain S36 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1041804..1052106
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q7260_RS05550 (Q7260_05550) | rpsR | 1042167..1042427 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| Q7260_RS05555 (Q7260_05555) | lon | 1042487..1044862 (-) | 2376 | WP_100626281.1 | endopeptidase La | - |
| Q7260_RS05560 (Q7260_05560) | - | 1044879..1045526 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| Q7260_RS05565 (Q7260_05565) | fliW | 1045687..1046076 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| Q7260_RS05570 (Q7260_05570) | proC | 1046076..1046807 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| Q7260_RS05575 (Q7260_05575) | ctsT | 1046804..1047106 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| Q7260_RS05580 (Q7260_05580) | - | 1047103..1047765 (+) | 663 | WP_052785236.1 | hypothetical protein | - |
| Q7260_RS05585 (Q7260_05585) | - | 1047762..1048214 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| Q7260_RS05590 (Q7260_05590) | hemD | 1048211..1048840 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| Q7260_RS05595 (Q7260_05595) | thiE | 1048818..1049450 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| Q7260_RS05600 (Q7260_05600) | thiD | 1049440..1050252 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| Q7260_RS05605 (Q7260_05605) | - | 1050249..1050935 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| Q7260_RS05610 (Q7260_05610) | - | 1050932..1051693 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=862398 Q7260_RS05575 WP_002853046.1 1046804..1047106(+) (ctsT) [Campylobacter jejuni strain S36]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=862398 Q7260_RS05575 WP_002853046.1 1046804..1047106(+) (ctsT) [Campylobacter jejuni strain S36]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |