Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   Q7260_RS03660 Genome accession   NZ_CP131440
Coordinates   681277..681714 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain S36     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 676277..686714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7260_RS03625 (Q7260_03625) - 676901..677926 (+) 1026 WP_305101557.1 sensor histidine kinase KdpD -
  Q7260_RS03630 (Q7260_03630) - 677950..678188 (+) 239 Protein_705 DUF4118 domain-containing protein -
  Q7260_RS03635 (Q7260_03635) - 678225..678578 (+) 354 WP_237914540.1 hypothetical protein -
  Q7260_RS03640 (Q7260_03640) - 678565..678696 (+) 132 WP_256379349.1 hypothetical protein -
  Q7260_RS03645 (Q7260_03645) uvrB 678691..680664 (-) 1974 WP_305101558.1 excinuclease ABC subunit UvrB -
  Q7260_RS03650 (Q7260_03650) - 680818..681048 (+) 231 WP_002852327.1 hypothetical protein -
  Q7260_RS03655 (Q7260_03655) - 681038..681280 (+) 243 WP_002852220.1 hypothetical protein -
  Q7260_RS03660 (Q7260_03660) Cj0683 681277..681714 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  Q7260_RS03665 (Q7260_03665) priA 681696..683549 (+) 1854 WP_002888182.1 primosomal protein N' -
  Q7260_RS03670 (Q7260_03670) cipA 683559..684953 (-) 1395 WP_002860010.1 DUF2972 domain-containing protein -
  Q7260_RS03675 (Q7260_03675) ispG 685099..686172 (+) 1074 WP_305101559.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=862395 Q7260_RS03660 WP_002852324.1 681277..681714(+) (Cj0683) [Campylobacter jejuni strain S36]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=862395 Q7260_RS03660 WP_002852324.1 681277..681714(+) (Cj0683) [Campylobacter jejuni strain S36]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1