Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   Q5794_RS03700 Genome accession   NZ_CP130958
Coordinates   684808..685002 (+) Length   64 a.a.
NCBI ID   WP_164797075.1    Uniprot ID   -
Organism   Priestia megaterium strain BS2-10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 679808..690002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q5794_RS03675 (Q5794_03675) galT 679871..681394 (+) 1524 WP_214984705.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  Q5794_RS03680 (Q5794_03680) - 681437..682321 (-) 885 WP_214984707.1 NAD(P)-dependent oxidoreductase -
  Q5794_RS03685 (Q5794_03685) - 682525..682713 (-) 189 WP_013055400.1 YjzD family protein -
  Q5794_RS03690 (Q5794_03690) - 682923..683663 (+) 741 WP_013055401.1 hypothetical protein -
  Q5794_RS03695 (Q5794_03695) - 683846..684730 (+) 885 WP_214984710.1 NAD(P)-dependent oxidoreductase -
  Q5794_RS03700 (Q5794_03700) comZ 684808..685002 (+) 195 WP_164797075.1 ComZ family protein Regulator
  Q5794_RS03705 (Q5794_03705) - 685031..685231 (-) 201 WP_214984713.1 hypothetical protein -
  Q5794_RS03710 (Q5794_03710) - 685488..686426 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  Q5794_RS03715 (Q5794_03715) fabF 686466..687707 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  Q5794_RS03720 (Q5794_03720) - 687814..688587 (+) 774 WP_016763040.1 DUF2268 domain-containing protein -
  Q5794_RS03725 (Q5794_03725) - 688813..689835 (+) 1023 WP_214984719.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7343.37 Da        Isoelectric Point: 3.9327

>NTDB_id=862305 Q5794_RS03700 WP_164797075.1 684808..685002(+) (comZ) [Priestia megaterium strain BS2-10]
MDEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=862305 Q5794_RS03700 WP_164797075.1 684808..685002(+) (comZ) [Priestia megaterium strain BS2-10]
ATGGATGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCGATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563