Detailed information NTG0086223

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: KI212_RS06090
• Genome accession: NZ_AP024589
• Coordinates: 1290341..1292770 (-)
• Length: 809 a.a.
• NCBI ID: WP_059107228.1
• Uniprot ID: A0AAP8PMM7
• Organism: Staphylococcus auricularis strain JCM 2421
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1285341..1297770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KI212_RS06070 (JCM2421_12490)	-	1286268..1286588 (-)	321	WP_059107232.1	DUF1292 domain-containing protein	-
KI212_RS06075 (JCM2421_12500)	ruvX	1286604..1287032 (-)	429	WP_059107231.1	Holliday junction resolvase RuvX	-
KI212_RS06080 (JCM2421_12510)	-	1287045..1287299 (-)	255	WP_059107230.1	IreB family regulatory phosphoprotein	-
KI212_RS06085 (JCM2421_12520)	alaS	1287379..1290009 (-)	2631	WP_059107229.1	alanine--tRNA ligase	-
KI212_RS06090 (JCM2421_12530)	recD2	1290341..1292770 (-)	2430	WP_059107228.1	ATP-dependent RecD-like DNA helicase	Machinery gene
KI212_RS06095 (JCM2421_12540)	-	1292772..1293440 (-)	669	WP_059107227.1	tetratricopeptide repeat protein	-
KI212_RS06100 (JCM2421_12550)	mnmA	1293573..1294685 (-)	1113	WP_059107226.1	tRNA 2-thiouridine(34) synthase MnmA	-
KI212_RS06105 (JCM2421_12560)	-	1294686..1295828 (-)	1143	WP_059107225.1	cysteine desulfurase family protein	-
KI212_RS06110 (JCM2421_12570)	-	1296140..1297141 (+)	1002	WP_059107224.1	LLM class flavin-dependent oxidoreductase	-
KI212_RS06115 (JCM2421_12580)	-	1297380..1297565 (-)	186	WP_059107223.1	CsbD family protein	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 91126.30 Da
• Isoelectric Point: 4.3927

>NTDB_id=86223 KI212_RS06090 WP_059107228.1 1290341..1292770(-) (recD2) [Staphylococcus auricularis strain JCM 2421]
MEEGPTLFEQTTVKGTVDAIVFQNKDNFYTVLKVEPSESDETFDSTPTVVGFFPDIVEGDVYTFKGQIVNHTKYGKQLKA
ETFEKELPQTKEAIISYLSSDLFKGVGKKTAQSIVNALGDNAINDILNDETLLSKVPGLSKKKQQQIAEQINANQETEKI
IIRLHDLGFGPKLAMNIYQTYMSDTLEIVEKKPYQLVYDVKGIGFNKADTLARNIGIAYDDPERIKAGLLYVLEEECVKQ
GHTYLPTSYVYEMTVDMLSQPPEETIETALVESMTQELIEETKLIEHEDQLAIPSLYYSELKSVQTLYRVFSYTHKMTEF
ELSDLQLHIGEIEERQEVSYAALQKEALQTAMNTKVMLLTGGPGTGKTTVIKGIVDLYAEVHGISLDYDDYSEDDYPVVL
AAPTGRAAKRLAEATGLEAMTIHRLIGWNQDTQPEDILDHEINARLIIIDEMSMVDTWLFHQFMSAVPLDAQIIFVGDED
QLPSVGPGQVFKDLIESKVIPRVNLTEVYRQQDGSSIIELAHHIKLGQPIDITKRYHDRNFIRCGAEQIPNVVEQIVSNA
VTKGYDMSDIQVLAPMYKGSAGIKKLNKVLQDILNPKAKDSREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGVF
WAKENALNKDVLVVDFEGNEITFTRQDLIELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQKPILYTGLTRAKQSLVL
LGDPQAFDIGLNTEGKARMTQLCTFLKQYFGEDEDNNTEEHNSEVTDADSEEAETPTQEANFVLTETDMFSIDPMINMGK
VTPYDFNDD

Nucleotide

• Length: 2430 bp

>NTDB_id=86223 KI212_RS06090 WP_059107228.1 1290341..1292770(-) (recD2) [Staphylococcus auricularis strain JCM 2421]
ATGGAGGAAGGCCCTACATTGTTTGAACAGACGACAGTGAAAGGCACTGTTGACGCAATCGTATTCCAAAATAAAGATAA
TTTTTATACTGTGTTAAAAGTAGAGCCTAGTGAGTCAGATGAAACGTTTGATTCAACGCCAACGGTTGTAGGGTTCTTTC
CTGACATTGTAGAAGGTGATGTGTATACCTTCAAAGGCCAAATTGTTAATCACACCAAATATGGTAAGCAACTAAAAGCC
GAAACGTTTGAAAAAGAATTACCTCAAACAAAAGAAGCCATCATCAGTTATTTATCTAGCGATCTTTTTAAAGGTGTCGG
TAAAAAAACTGCTCAAAGTATTGTGAATGCCCTTGGAGATAATGCGATTAATGACATATTAAATGATGAAACATTACTGT
CTAAAGTGCCTGGGCTTTCGAAAAAGAAACAACAACAAATTGCTGAACAAATCAATGCAAACCAAGAAACAGAAAAAATT
ATTATCCGGTTACATGATTTAGGTTTCGGACCTAAACTGGCAATGAATATCTATCAAACATACATGAGTGATACGTTAGA
GATTGTAGAGAAAAAGCCCTACCAACTCGTTTATGATGTTAAGGGTATTGGTTTTAATAAAGCAGATACACTCGCACGTA
ATATTGGTATTGCTTATGACGATCCAGAACGCATTAAAGCGGGTTTACTTTATGTTCTCGAAGAAGAATGTGTGAAACAA
GGTCATACGTATCTCCCAACATCATATGTTTATGAGATGACAGTAGACATGTTGTCACAACCACCTGAAGAAACGATTGA
GACAGCGTTAGTTGAAAGCATGACGCAGGAATTGATTGAGGAAACTAAATTAATTGAACACGAAGATCAGCTCGCAATAC
CTAGCCTCTATTACTCCGAATTAAAGAGTGTCCAAACACTGTATAGAGTCTTTAGCTACACACATAAAATGACAGAATTT
GAATTATCAGATTTACAATTACATATCGGAGAAATTGAAGAACGACAAGAAGTCAGTTATGCCGCTTTACAAAAAGAAGC
ATTACAGACAGCGATGAATACGAAAGTCATGTTGCTCACAGGGGGCCCCGGAACTGGTAAAACAACAGTCATTAAAGGTA
TTGTTGATTTATATGCAGAAGTCCATGGTATTTCACTCGATTATGATGATTATAGCGAAGATGATTATCCAGTAGTGCTC
GCAGCGCCTACAGGTCGTGCAGCGAAACGGTTAGCTGAAGCGACAGGCTTAGAAGCGATGACGATTCACCGTTTAATTGG
ATGGAATCAGGATACCCAACCGGAAGACATTTTAGATCATGAAATTAATGCTCGGTTGATTATCATCGATGAGATGTCGA
TGGTAGATACATGGTTGTTCCATCAATTTATGAGTGCTGTGCCGTTAGATGCACAGATTATCTTTGTCGGTGATGAAGAC
CAGCTTCCATCTGTTGGACCAGGTCAAGTGTTCAAAGATTTAATTGAATCGAAAGTCATTCCTAGGGTGAACTTAACCGA
AGTTTATCGTCAACAAGATGGTTCAAGTATTATTGAACTCGCCCATCACATTAAATTGGGTCAACCGATTGATATTACGA
AACGGTATCACGATCGAAATTTCATCAGATGTGGTGCAGAACAAATTCCGAATGTTGTCGAGCAGATTGTATCGAATGCT
GTAACGAAAGGTTACGACATGAGTGATATTCAAGTCCTTGCACCGATGTATAAAGGCTCAGCAGGGATTAAAAAGCTCAA
TAAAGTACTGCAAGACATTTTAAACCCGAAAGCGAAAGACTCACGTGAAATTGAATTTGGTGATGTGGTCTTCCGTAAGG
GCGATAAAGTATTACAGCTTGTCAATCGACCTAACGATAATATCTTCAACGGAGATATTGGCGTTATTGTAGGAGTGTTT
TGGGCTAAAGAAAATGCGCTGAATAAAGATGTCTTAGTCGTTGATTTTGAAGGCAATGAAATTACCTTCACACGACAAGA
TTTAATTGAATTAACTCATGCTTATTGCACTTCGATCCATAAATCTCAAGGTTCGGAATTCCCAATCGTGATCATGCCAA
TGGTGAAACAATATTATCGCATGTTGCAAAAACCAATCCTTTATACAGGGTTAACAAGGGCGAAACAATCACTGGTGTTA
CTCGGAGATCCCCAAGCTTTTGACATTGGTCTTAATACTGAAGGTAAGGCACGGATGACACAGCTTTGTACATTCTTAAA
ACAATACTTCGGTGAAGATGAAGATAACAACACAGAAGAACACAATTCTGAAGTGACTGATGCAGATAGTGAGGAAGCAG
AAACACCAACACAAGAAGCTAATTTTGTATTGACGGAAACGGATATGTTCAGCATTGATCCAATGATTAATATGGGAAAA
GTTACGCCTTACGATTTCAATGATGATTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

• Helix-hairpin-helix domain (HHH_5) (104-151)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-546)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.938	99.753	0.498