Detailed information NTG0086174

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ78_RS21495
• Genome accession: NZ_AP027470
• Coordinates: 4383271..4384296 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 15.03CC
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4378271..4389296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ78_RS21475 (VEE69_41260)	metJ	4379332..4379649 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ78_RS21480 (VEE69_41270)	yiiX	4379833..4380441 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ78_RS21485 (VEE69_41280)	rpmE	4380502..4380714 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ78_RS21490 (VEE69_41290)	priA	4380917..4383115 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ78_RS21495 (VEE69_41300)	cytR	4383271..4384296 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ78_RS21500 (VEE69_41310)	ftsN	4384388..4385347 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ78_RS21505 (VEE69_41320)	hslV	4385440..4385970 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ78_RS21510 (VEE69_41330)	hslU	4385980..4387311 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ78_RS21515 (VEE69_41340)	menA	4387378..4388304 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ78_RS21520 (VEE69_41350)	rraA	4388397..4388882 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ78_RS21525 (VEE69_41360)	zapB	4388967..4389212 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=86174 AABJ78_RS21495 WP_000644904.1 4383271..4384296(+) (cytR) [Escherichia coli strain 15.03CC]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=86174 AABJ78_RS21495 WP_000644904.1 4383271..4384296(+) (cytR) [Escherichia coli strain 15.03CC]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
AGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCAATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628