Detailed information NTG0861602

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q6378_RS05680
• Genome accession: NZ_CP130889
• Coordinates: 1087247..1088500 (-)
• Length: 417 a.a.
• NCBI ID: WP_047920694.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ209649
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1082247..1093500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6378_RS05645 (Q6378_05645)	-	1083284..1083667 (+)	384	Protein_1103	pilin	-
Q6378_RS05650 (Q6378_05650)	-	1083728..1084048 (+)	321	Protein_1104	pilin	-
Q6378_RS05655 (Q6378_05655)	-	1084171..1084289 (+)	119	Protein_1105	pilin	-
Q6378_RS05660 (Q6378_05660)	-	1085105..1085610 (+)	506	Protein_1106	pilin	-
Q6378_RS05670 (Q6378_05670)	-	1086153..1086976 (+)	824	Protein_1107	opacity family porin	-
Q6378_RS05675 (Q6378_05675)	-	1086990..1087181 (+)	192	WP_071226957.1	hypothetical protein	-
Q6378_RS05680 (Q6378_05680)	pilA	1087247..1088500 (-)	1254	WP_047920694.1	signal recognition particle-docking protein FtsY	Machinery gene
Q6378_RS05685 (Q6378_05685)	msrAB	1088646..1090214 (+)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
Q6378_RS05690 (Q6378_05690)	-	1090298..1090780 (-)	483	WP_003694396.1	CinA family protein	-
Q6378_RS05695 (Q6378_05695)	-	1090806..1091654 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
Q6378_RS05700 (Q6378_05700)	-	1091748..1092749 (-)	1002	WP_103195218.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44317.68 Da
• Isoelectric Point: 4.8618

>NTDB_id=861602 Q6378_RS05680 WP_047920694.1 1087247..1088500(-) (pilA) [Neisseria gonorrhoeae strain NJ209649]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMDATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=861602 Q6378_RS05680 WP_047920694.1 1087247..1088500(-) (pilA) [Neisseria gonorrhoeae strain NJ209649]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGATGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTCATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998