Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   Q6357_RS19515 Genome accession   NZ_CP130888
Coordinates   3796962..3797159 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain 28M1-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3791962..3802159
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6357_RS19490 (Q6357_19490) - 3792324..3793304 (-) 981 WP_047945538.1 ABC transporter ATP-binding protein -
  Q6357_RS19495 (Q6357_19495) - 3793475..3794269 (-) 795 WP_056407963.1 DUF2268 domain-containing protein -
  Q6357_RS19500 (Q6357_19500) fabF 3794347..3795588 (-) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  Q6357_RS19505 (Q6357_19505) - 3795610..3796548 (-) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  Q6357_RS19510 (Q6357_19510) - 3796718..3796951 (+) 234 WP_008348506.1 hypothetical protein -
  Q6357_RS19515 (Q6357_19515) comZ 3796962..3797159 (-) 198 WP_008348507.1 ComZ family protein Regulator
  Q6357_RS19520 (Q6357_19520) med 3797171..3798136 (-) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  Q6357_RS19525 (Q6357_19525) - 3798227..3798802 (-) 576 WP_061418679.1 hypothetical protein -
  Q6357_RS19530 (Q6357_19530) - 3798878..3799618 (-) 741 WP_304717262.1 hypothetical protein -
  Q6357_RS19535 (Q6357_19535) - 3799831..3800025 (+) 195 WP_008348514.1 YjzD family protein -
  Q6357_RS19540 (Q6357_19540) - 3800145..3801410 (-) 1266 WP_100324880.1 MFS transporter -
  Q6357_RS19545 (Q6357_19545) - 3801580..3801759 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=861568 Q6357_RS19515 WP_008348507.1 3796962..3797159(-) (comZ) [Bacillus altitudinis strain 28M1-1]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=861568 Q6357_RS19515 WP_008348507.1 3796962..3797159(-) (comZ) [Bacillus altitudinis strain 28M1-1]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662