Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   Q6357_RS18235 Genome accession   NZ_CP130888
Coordinates   3559602..3560183 (-) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 28M1-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3554602..3565183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6357_RS18205 (Q6357_18205) - 3554634..3555125 (-) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -
  Q6357_RS18210 (Q6357_18210) mobB 3555118..3555645 (-) 528 WP_304717228.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  Q6357_RS18215 (Q6357_18215) glp 3555627..3556901 (-) 1275 WP_304717229.1 gephyrin-like molybdotransferase Glp -
  Q6357_RS18220 (Q6357_18220) - 3556911..3557927 (-) 1017 WP_045034214.1 thiazole biosynthesis adenylyltransferase ThiF -
  Q6357_RS18225 (Q6357_18225) - 3557957..3558538 (-) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  Q6357_RS18230 (Q6357_18230) - 3558622..3559539 (+) 918 WP_079920060.1 sigmaE regulated sporulation protein -
  Q6357_RS18235 (Q6357_18235) rok 3559602..3560183 (-) 582 WP_007498648.1 hypothetical protein Regulator
  Q6357_RS18240 (Q6357_18240) - 3560665..3561123 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  Q6357_RS18245 (Q6357_18245) ahpA 3561400..3561942 (-) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  Q6357_RS18250 (Q6357_18250) - 3562214..3563023 (+) 810 WP_041507374.1 mechanosensitive ion channel family protein -
  Q6357_RS18255 (Q6357_18255) - 3563048..3563290 (-) 243 WP_024424725.1 YkuS family protein -
  Q6357_RS18260 (Q6357_18260) - 3563341..3564519 (-) 1179 WP_045034211.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=861559 Q6357_RS18235 WP_007498648.1 3559602..3560183(-) (rok) [Bacillus altitudinis strain 28M1-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=861559 Q6357_RS18235 WP_007498648.1 3559602..3560183(-) (rok) [Bacillus altitudinis strain 28M1-1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782