Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   Q6357_RS14075 Genome accession   NZ_CP130888
Coordinates   2748665..2749468 (+) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain 28M1-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2743665..2754468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6357_RS14055 (Q6357_14055) - 2743672..2744526 (+) 855 WP_007501164.1 TlyA family RNA methyltransferase -
  Q6357_RS14060 (Q6357_14060) argR 2744688..2745137 (+) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -
  Q6357_RS14065 (Q6357_14065) recN 2745172..2746905 (+) 1734 WP_268382927.1 DNA repair protein RecN Machinery gene
  Q6357_RS14070 (Q6357_14070) spoIVB 2747104..2748381 (+) 1278 WP_041506972.1 SpoIVB peptidase -
  Q6357_RS14075 (Q6357_14075) spo0A 2748665..2749468 (+) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  Q6357_RS14080 (Q6357_14080) - 2749918..2751018 (+) 1101 WP_019743381.1 Rap family tetratricopeptide repeat protein -
  Q6357_RS14085 (Q6357_14085) - 2751245..2751982 (+) 738 WP_061419572.1 glycerophosphodiester phosphodiesterase -
  Q6357_RS14090 (Q6357_14090) - 2752016..2752252 (-) 237 WP_017357960.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=861551 Q6357_RS14075 WP_008342226.1 2748665..2749468(+) (spo0A) [Bacillus altitudinis strain 28M1-1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=861551 Q6357_RS14075 WP_008342226.1 2748665..2749468(+) (spo0A) [Bacillus altitudinis strain 28M1-1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCTATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884