Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q5Z11_RS15055 Genome accession   NZ_CP130832
Coordinates   3354639..3355040 (-) Length   133 a.a.
NCBI ID   WP_057628851.1    Uniprot ID   -
Organism   Stenotrophomonas sp. 610A2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3349639..3360040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q5Z11_RS15040 - 3351650..3353686 (-) 2037 WP_303747142.1 methyl-accepting chemotaxis protein -
  Q5Z11_RS15045 - 3353728..3354258 (-) 531 WP_303747143.1 chemotaxis protein CheW -
  Q5Z11_RS15050 - 3354258..3354620 (-) 363 WP_303747144.1 PleD family two-component system response regulator -
  Q5Z11_RS15055 pilG 3354639..3355040 (-) 402 WP_057628851.1 twitching motility response regulator PilG Regulator
  Q5Z11_RS15060 gshB 3355282..3356229 (+) 948 WP_303747145.1 glutathione synthase -
  Q5Z11_RS15065 - 3356229..3357119 (+) 891 WP_303747146.1 energy transducer TonB -
  Q5Z11_RS15070 tsaB 3357249..3357956 (-) 708 WP_303747147.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14630.03 Da        Isoelectric Point: 6.3423

>NTDB_id=861498 Q5Z11_RS15055 WP_057628851.1 3354639..3355040(-) (pilG) [Stenotrophomonas sp. 610A2]
MVENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTRDELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=861498 Q5Z11_RS15055 WP_057628851.1 3354639..3355040(-) (pilG) [Stenotrophomonas sp. 610A2]
ATGGTTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGCTGAAGGTGATGGTCATCGATGATTCGAAGACCATCCGACG
TACGGCTGAAACGCTGCTCAAACGTGAAGGTTGTGAGGTCGTGACCGCTACCGACGGTTTCGAGGCTTTGGCCAAGATCG
CCGACCAGCAACCGCAGATCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCCTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACACCTGTGATCATGTTGTCATCCAAGGATGGCCTGTTCGACAAAGCCCGTGGCCGCAT
CGTCGGTTCCGAGCAATACCTCACCAAGCCATTTACCCGCGACGAACTACTAGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.033

90.977

0.692