Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q5Z10_RS16580 Genome accession   NZ_CP130831
Coordinates   3609530..3609931 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. 704A1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3604530..3614931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q5Z10_RS16565 - 3606541..3608577 (-) 2037 WP_303636472.1 methyl-accepting chemotaxis protein -
  Q5Z10_RS16570 - 3608619..3609149 (-) 531 WP_303636473.1 chemotaxis protein CheW -
  Q5Z10_RS16575 - 3609149..3609511 (-) 363 WP_303636474.1 response regulator -
  Q5Z10_RS16580 pilG 3609530..3609931 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  Q5Z10_RS16585 gshB 3610175..3611122 (+) 948 WP_303636475.1 glutathione synthase -
  Q5Z10_RS16590 - 3611122..3612006 (+) 885 WP_303636476.1 energy transducer TonB -
  Q5Z10_RS16595 tsaB 3612243..3612956 (-) 714 WP_303636477.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=861476 Q5Z10_RS16580 WP_005418455.1 3609530..3609931(-) (pilG) [Stenotrophomonas sp. 704A1]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=861476 Q5Z10_RS16580 WP_005418455.1 3609530..3609931(-) (pilG) [Stenotrophomonas sp. 704A1]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGTTGAAGCGCGAGGGCTGCGAAGTCGTGACCGCGACCGATGGCTTCGAAGCGCTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTTGTGGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCACTGATCAAG
GGTAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCTTTCACGCGGGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677