Detailed information NTG0861393

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: WCU38_RS04135
• Genome accession: NZ_CP147578
• Coordinates: 821819..823024 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain GN05476
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 816819..828024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WCU38_RS04115 (WCU38_04115)	-	816881..818137 (+)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-
WCU38_RS04120 (WCU38_04120)	neuC	818134..819309 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
WCU38_RS04125 (WCU38_04125)	-	819302..820450 (+)	1149	WP_000197083.1	DUF6716 putative glycosyltransferase	-
WCU38_RS04130 (WCU38_04130)	-	820440..821669 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
WCU38_RS04135 (WCU38_04135)	kpsS	821819..823024 (-)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
WCU38_RS04140 (WCU38_04140)	-	823059..825086 (-)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
WCU38_RS04145 (WCU38_04145)	kdsB	825083..825823 (-)	741	WP_000030761.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
WCU38_RS04150 (WCU38_04150)	-	825833..827509 (-)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=861393 WCU38_RS04135 WP_001161835.1 821819..823024(-) (kpsS) [Escherichia coli strain GN05476]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=861393 WCU38_RS04135 WP_001161835.1 821819..823024(-) (kpsS) [Escherichia coli strain GN05476]
ATGCAAGGTAATGCATTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGAATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387